Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 SLC25A51P2-201ENST00000535708 889 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC126323.4-201ENST00000566935 234 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC022662.1-201ENST00000580252 331 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC092032.1-201ENST00000603090 165 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL163642.2-201ENST00000604722 1019 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AL162574.1-201ENST00000615702 950 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC027506.1-201ENST00000621395 198 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC015722.2-201ENST00000622210 551 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 AC012629.3-201ENST00000623397 328 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 MIR665-201ENST00000635949 72 ntBASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.67□□□□□ -1.34
PTCHD1Q96NR3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 RN7SKP107-201ENST00000364157 290 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 RNU6-31P-201ENST00000384388 108 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC244452.1-201ENST00000413798 141 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ELOCP8-201ENST00000439309 332 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ELOCP15-201ENST00000442090 332 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 BX323845.2-201ENST00000458382 234 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AP005202.1-201ENST00000489915 867 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 RPL7L1P7-201ENST00000509986 724 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 NDUFB4P12-201ENST00000513465 390 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 FABP5P12-201ENST00000515543 389 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 DEFB130C-202ENST00000530001 230 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC023080.1-201ENST00000551663 931 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 DPPA3P2-201ENST00000553589 478 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CCDC58P1-201ENST00000578567 430 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 RN7SL131P-201ENST00000579043 256 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL589765.6-201ENST00000601909 549 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL512430.4-201ENST00000603085 613 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 NTAN1P1-201ENST00000603150 646 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 DUXAP11-201ENST00000603858 526 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL591222.2-201ENST00000604443 754 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL161420.1-201ENST00000619393 264 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC087894.3-201ENST00000623682 349 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms