Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC002310.3-201ENST00000569728 723 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 MIR6778-201ENST00000617912 73 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 SNORA11.6-201ENST00000619030 128 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AL357140.4-201ENST00000636827 412 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf72Q96LT7 AC024651.2-201ENST00000562480 2098 ntBASIC6.18□□□□□ -1.42
C9orf72Q96LT7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 IFIT1P1-201ENST00000400497 1449 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 GCNT1P4-201ENST00000404096 329 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 RPL7AP14-201ENST00000424041 802 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC007679.3-201ENST00000434035 414 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 KRT8P51-201ENST00000438938 274 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 CUBNP2-201ENST00000443534 1139 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 RPL5P7-201ENST00000444235 813 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 OSTCP1-201ENST00000455507 450 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AP002884.1-201ENST00000479691 655 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 RPL23AP40-201ENST00000487630 390 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SNX18P25-201ENST00000510539 758 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SNORA81.2-201ENST00000516868 170 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC124916.2-201ENST00000604416 224 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC009237.12-201ENST00000604755 742 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 RPSAP75-201ENST00000605848 301 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AL157762.1-201ENST00000619612 415 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.17□□□□□ -1.42
C9orf72Q96LT7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf72Q96LT7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC011416.1-201ENST00000514947 1732 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 OR7E156P-201ENST00000400303 464 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 RN7SKP17-201ENST00000411242 351 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 RPSAP65-201ENST00000429660 595 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AC094019.1-201ENST00000434678 472 ntBASIC6.16□□□□□ -1.42
C9orf72Q96LT7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf72Q96LT7 AL645936.1-201ENST00000441979 518 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms