Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC087565.3-202ENST00000642085 1603 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 AL121768.1-201ENST00000613917 2544 ntBASIC5.66□□□□□ -1.5
PTP4A1Q93096 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTP4A1Q93096 AC005702.3-201ENST00000585345 1447 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 CASC19-260ENST00000641828 2001 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 SNORD16-201ENST00000362803 99 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 RNU6-249P-201ENST00000363016 102 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 RPL23AP17-201ENST00000401064 499 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 MIR1266-201ENST00000408125 84 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL691447.1-201ENST00000419456 387 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC083862.1-201ENST00000427378 1242 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC097523.2-201ENST00000435551 652 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 HMGN1P32-201ENST00000441744 256 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 RAD1P2-201ENST00000446414 663 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL445991.1-201ENST00000450381 475 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL034369.1-201ENST00000453808 477 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 STRADBP1-201ENST00000478954 1281 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 RN7SL502P-201ENST00000481857 290 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 ATG10-AS1-201ENST00000504846 648 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC008945.1-201ENST00000505144 499 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC004232.2-201ENST00000574245 821 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC060766.1-201ENST00000590824 627 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC002069.2-201ENST00000603580 883 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC012213.4-201ENST00000606457 354 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AC004241.3-201ENST00000611728 517 ntBASIC5.65□□□□□ -1.5
PTP4A1Q93096 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.65□□□□□ -1.5
PTP4A1Q93096 AP002512.4-202ENST00000641599 4530 ntBASIC5.65□□□□□ -1.51
PTP4A1Q93096 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTP4A1Q93096 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTP4A1Q93096 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 LINC02019-201ENST00000608605 2060 ntBASIC5.65□□□□□ -1.51
PTP4A1Q93096 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTP4A1Q93096 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTP4A1Q93096 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PTP4A1Q93096 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.65□□□□□ -1.51
PTP4A1Q93096 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTP4A1Q93096 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms