Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 SNORA63.3-201ENST00000362682 132 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 RN7SKP257-201ENST00000364525 309 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 ARSFP1-201ENST00000398758 477 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AL035405.1-201ENST00000400795 710 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC013268.2-201ENST00000420753 337 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AL731534.1-201ENST00000434711 269 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AL133351.3-201ENST00000454998 193 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC008429.4-201ENST00000521201 182 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 OR6M2P-201ENST00000529831 871 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC068339.2-201ENST00000534395 618 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC008055.1-201ENST00000547032 609 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC027796.1-201ENST00000575593 512 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 MIR4732-201ENST00000581873 76 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC139792.1-201ENST00000607051 647 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC027449.1-201ENST00000608890 407 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC069234.4-201ENST00000621276 412 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 MIR6503-201ENST00000622884 86 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 LINC00216-201ENST00000623548 1126 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC097520.1-201ENST00000624435 385 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 AC068213.1-201ENST00000625124 226 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 CLUHP10-201ENST00000631979 980 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 SNX18P3-202ENST00000565670 1750 ntBASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
ATG4AQ8WYN0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RNU1-49P-201ENST00000363468 159 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RNA5SP346-201ENST00000363541 121 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 GNG5P2-201ENST00000372054 207 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AL157702.1-201ENST00000398764 426 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC234771.4-201ENST00000441416 730 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 RN7SL326P-201ENST00000477493 296 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 SNX18P24-201ENST00000505249 671 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 OR4D12P-201ENST00000509361 911 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC139713.1-202ENST00000512366 460 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 Y_RNA.710-201ENST00000516975 110 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC113192.3-201ENST00000529152 742 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC084851.2-201ENST00000530377 364 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC037479.1-201ENST00000558361 625 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC093510.2-201ENST00000562820 896 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC027216.1-201ENST00000577726 685 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC024267.2-201ENST00000582737 417 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AL589765.6-201ENST00000601909 549 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 CLIC4P2-201ENST00000601934 717 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 AC133794.1-201ENST00000602731 914 ntBASIC6.38□□□□□ -1.39
ATG4AQ8WYN0 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms