Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AL360271.1-201ENST00000395679 510 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 RN7SL97P-201ENST00000486780 299 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC004453.1-201ENST00000487895 408 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AL161912.4-201ENST00000623889 2468 ntBASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ALMS1Q8TCU4 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 OR7E25P-202ENST00000641088 5937 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 RPS15AP30-201ENST00000420976 390 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC006466.1-201ENST00000438721 289 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 NPM1P27-201ENST00000502784 830 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 MIR223-201ENST00000385204 110 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC009804.1-201ENST00000400949 179 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 UBE2V1P14-201ENST00000415815 558 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC099677.3-201ENST00000427081 395 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 RN7SL570P-201ENST00000484405 292 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC063977.5-201ENST00000601044 974 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC000068.2-201ENST00000608816 460 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 OR52B5P-201ENST00000435337 951 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC006116.3-201ENST00000592968 361 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC010245.2-201ENST00000606908 1167 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 OR52B5P-202ENST00000641118 1110 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC131971.1-201ENST00000332881 1482 ntBASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ALMS1Q8TCU4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC3.93□□□□□ -1.78
ALMS1Q8TCU4 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms