Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 RANP1-206ENST00000455094 651 ntBASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 HMGB1P42-201ENST00000532126 553 ntBASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 AL683813.2-201ENST00000605245 502 ntBASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFAP43Q8NDM7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 MIR130A-201ENST00000385274 89 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AL109941.1-201ENST00000401925 229 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AC005033.1-201ENST00000428904 813 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AC245047.2-201ENST00000441060 530 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 MRPS16P1-201ENST00000523462 412 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 HSPE1P2-201ENST00000554777 306 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 AL450226.2-201ENST00000622913 439 ntBASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFAP43Q8NDM7 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
CFAP43Q8NDM7 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL672167.3-201ENST00000465951 960 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AC083795.1-201ENST00000491760 320 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 SUGT1P3-202ENST00000604259 383 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL139099.4-201ENST00000614802 114 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AC130304.1-201ENST00000622942 2385 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 AL359976.1-201ENST00000418655 3528 ntBASIC9.14□□□□□ -0.95
CFAP43Q8NDM7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 RNA5SP30-201ENST00000365552 115 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 FAR2P1-206ENST00000449736 709 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC021146.10-201ENST00000515628 706 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 MIR4436B2-201ENST00000581415 91 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 MIR4436B1-201ENST00000583272 91 ntBASIC9.13□□□□□ -0.95
CFAP43Q8NDM7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms