Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 PPIAP32-201ENST00000449940 472 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 Z83838.1-202ENST00000456225 839 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC073594.1-201ENST00000462065 364 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 RN7SL643P-201ENST00000471845 291 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 RPS7P11-201ENST00000484240 586 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 RNA5SP400-201ENST00000517155 111 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 IGHV4-55-201ENST00000520889 368 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AL136520.1-202ENST00000555494 763 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 AC106858.1-201ENST00000637497 429 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 OR7E91P-202ENST00000642062 1198 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 MAPK10-338ENST00000641647 3362 ntBASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP4Q8N3C7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RNU6-891P-201ENST00000384280 111 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SNORD94-201ENST00000386037 137 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RNU6-316P-201ENST00000391027 107 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 VIM2P-201ENST00000402383 1294 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RN7SKP129-201ENST00000410288 299 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 GABARAPL3-201ENST00000412799 354 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 DHFRP2-201ENST00000414224 547 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RPL21P50-201ENST00000417698 477 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 TRGV7-201ENST00000427089 353 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC079922.1-201ENST00000443291 359 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 GXYLT1P1-201ENST00000446657 490 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AP000547.1-201ENST00000454360 617 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RANP2-201ENST00000456833 229 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL355032.1-201ENST00000472981 438 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 GM2AP2-201ENST00000491764 562 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL049874.4-201ENST00000557593 255 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 MTND2P13-201ENST00000577438 1039 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC022387.2-201ENST00000604050 448 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC092944.2-201ENST00000605443 889 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AC003992.1-201ENST00000635364 557 ntBASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP4Q8N3C7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms