Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ANP32BP1-202ENST00000568553 737 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 MIR4301-201ENST00000577203 66 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC021851.1-201ENST00000608537 1082 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC027449.1-201ENST00000608890 407 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 MIR6071-201ENST00000616741 78 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC007275.1-201ENST00000621243 671 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 MIR1910-201ENST00000636955 80 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC013437.2-201ENST00000639587 677 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC010325.3-201ENST00000641084 394 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 MTND5P11-201ENST00000511037 1812 ntBASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CCDC144BQ3MJ40 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC137056.2-201ENST00000624055 1958 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 PPIAP24-201ENST00000328558 471 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CYCSP17-201ENST00000407870 315 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 RNU2-17P-201ENST00000410290 190 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MRPS21P5-201ENST00000417885 231 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 PRUNEP1-201ENST00000425846 705 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL606517.1-201ENST00000446914 387 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 RPL7AP23-201ENST00000482625 776 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 RN7SL561P-201ENST00000488553 281 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC021006.1-201ENST00000489849 553 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC112484.3-201ENST00000505910 329 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC018797.1-201ENST00000510791 255 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MAST4-IT1-201ENST00000514241 658 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC092375.1-201ENST00000550410 637 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL589765.6-201ENST00000601909 549 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC114477.1-201ENST00000605097 605 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AL355480.1-201ENST00000629041 99 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 MAPK10-357ENST00000641831 2858 ntBASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CCDC144BQ3MJ40 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AL669831.5-218ENST00000591702 1873 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 LINC01613-201ENST00000561476 2780 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 RNA5SP279-201ENST00000365513 117 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 U3.52-201ENST00000384034 216 ntBASIC7.62□□□□□ -1.19
CCDC144BQ3MJ40 AL034403.1-201ENST00000399414 885 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms