Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 MTND6P32-201ENST00000457611 483 ntBASIC5.75□□□□□ -1.49
LTBQ06643 H3F3AP5-201ENST00000475267 429 ntBASIC5.75□□□□□ -1.49
LTBQ06643 RN7SL174P-201ENST00000475578 289 ntBASIC5.75□□□□□ -1.49
LTBQ06643 RN7SL413P-201ENST00000482700 297 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
LTBQ06643 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 AP001804.1-201ENST00000526868 919 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 RPL41P2-201ENST00000544920 409 ntBASIC5.75□□□□□ -1.49
LTBQ06643 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 MRPS21P9-201ENST00000571150 257 ntBASIC5.75□□□□□ -1.49
LTBQ06643 MIR3614-201ENST00000581261 86 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.75□□□□□ -1.49
LTBQ06643 SMIM12P1-201ENST00000603004 274 ntBASIC5.75□□□□□ -1.49
LTBQ06643 AC024589.2-201ENST00000605642 1294 ntBASIC5.75□□□□□ -1.49
LTBQ06643 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 AC022306.3-201ENST00000619930 550 ntBASIC5.75□□□□□ -1.49
LTBQ06643 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
LTBQ06643 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 AC005225.5-201ENST00000623547 2225 ntBASIC5.75□□□□□ -1.49
LTBQ06643 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.75□□□□□ -1.49
LTBQ06643 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LTBQ06643 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LTBQ06643 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.75□□□□□ -1.49
LTBQ06643 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
LTBQ06643 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LTBQ06643 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 LCN1P2-201ENST00000372030 223 ntBASIC5.74□□□□□ -1.49
LTBQ06643 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LTBQ06643 SNORA70.9-201ENST00000384370 135 ntBASIC5.74□□□□□ -1.49
LTBQ06643 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 YWHAZP6-201ENST00000399764 738 ntBASIC5.74□□□□□ -1.49
LTBQ06643 RN7SKP161-201ENST00000411110 305 ntBASIC5.74□□□□□ -1.49
LTBQ06643 NPM1P36-201ENST00000415681 835 ntBASIC5.74□□□□□ -1.49
LTBQ06643 SFR1P2-201ENST00000421841 730 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AC104843.2-201ENST00000427666 297 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 RPL17P35-201ENST00000432217 549 ntBASIC5.74□□□□□ -1.49
LTBQ06643 H3F3BP1-201ENST00000440551 403 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AC114878.1-201ENST00000441166 358 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.74□□□□□ -1.49
LTBQ06643 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 RAD1P2-201ENST00000446414 663 ntBASIC5.74□□□□□ -1.49
LTBQ06643 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 HAUS1P1-201ENST00000505275 832 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.74□□□□□ -1.49
LTBQ06643 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.74□□□□□ -1.49
LTBQ06643 AC106800.3-201ENST00000511389 308 ntBASIC5.74□□□□□ -1.49
LTBQ06643 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.74□□□□□ -1.49
LTBQ06643 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.74□□□□□ -1.49
LTBQ06643 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.74□□□□□ -1.49
LTBQ06643 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.74□□□□□ -1.49
LTBQ06643 RPL3P13-201ENST00000550415 216 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.74□□□□□ -1.49
LTBQ06643 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 AC004232.2-201ENST00000574245 821 ntBASIC5.74□□□□□ -1.49
LTBQ06643 SYPL1P2-201ENST00000582878 727 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.74□□□□□ -1.49
LTBQ06643 AL589863.1-201ENST00000595383 631 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.74□□□□□ -1.49
LTBQ06643 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 AC026979.4-201ENST00000606555 645 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AL096712.1-201ENST00000614561 159 ntBASIC5.74□□□□□ -1.49
LTBQ06643 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.74□□□□□ -1.49
LTBQ06643 AC079776.5-201ENST00000641920 211 ntBASIC5.74□□□□□ -1.49
LTBQ06643 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.74□□□□□ -1.49
LTBQ06643 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LTBQ06643 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms