Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 WDR95P-201ENST00000425638 1542 ntBASIC4.99□□□□□ -1.61
LMO4P61968 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 AP000568.1-201ENST00000282964 442 ntBASIC4.99□□□□□ -1.61
LMO4P61968 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 RN7SKP128-201ENST00000364270 303 ntBASIC4.99□□□□□ -1.61
LMO4P61968 SNRPEP6-201ENST00000407465 277 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AC245060.4-201ENST00000413293 1121 ntBASIC4.99□□□□□ -1.61
LMO4P61968 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 KIF4CP-201ENST00000422742 1279 ntBASIC4.99□□□□□ -1.61
LMO4P61968 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 UBE2V2P3-201ENST00000433562 437 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 AC103563.5-201ENST00000455643 364 ntBASIC4.99□□□□□ -1.61
LMO4P61968 RNU7-157P-201ENST00000459600 66 ntBASIC4.99□□□□□ -1.61
LMO4P61968 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 AC019227.1-201ENST00000526902 510 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 DPPA3P2-202ENST00000557188 1219 ntBASIC4.99□□□□□ -1.61
LMO4P61968 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.99□□□□□ -1.61
LMO4P61968 AC119403.2-201ENST00000590960 598 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AC107993.1-201ENST00000591343 684 ntBASIC4.99□□□□□ -1.61
LMO4P61968 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 AC091193.1-201ENST00000604640 448 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AC100814.1-201ENST00000606963 623 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 AC126175.1-201ENST00000617041 758 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AP005431.1-201ENST00000618479 319 ntBASIC4.99□□□□□ -1.61
LMO4P61968 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 AL356094.1-201ENST00000624663 1212 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 OR8G3P-202ENST00000641572 1255 ntBASIC4.99□□□□□ -1.61
LMO4P61968 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.99□□□□□ -1.61
LMO4P61968 AC015689.2-201ENST00000528172 1738 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AC119674.1-213ENST00000641177 1386 ntBASIC4.99□□□□□ -1.61
LMO4P61968 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 AC007114.2-201ENST00000576014 4281 ntBASIC4.99□□□□□ -1.61
LMO4P61968 AOX3P-204ENST00000491025 2107 ntBASIC4.99□□□□□ -1.61
LMO4P61968 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 CCNT2P1-201ENST00000423082 1315 ntBASIC4.98□□□□□ -1.61
LMO4P61968 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 AC106872.5-201ENST00000508856 1416 ntBASIC4.98□□□□□ -1.61
LMO4P61968 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 AL117339.4-201ENST00000608335 7063 ntBASIC4.98□□□□□ -1.61
LMO4P61968 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 SELENOWP1-201ENST00000322792 252 ntBASIC4.98□□□□□ -1.61
LMO4P61968 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LMO4P61968 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AC087752.1-201ENST00000391360 558 ntBASIC4.98□□□□□ -1.61
LMO4P61968 RPS3AP2-201ENST00000407190 754 ntBASIC4.98□□□□□ -1.61
LMO4P61968 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 RNA5SP178-201ENST00000410380 128 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.98□□□□□ -1.61
LMO4P61968 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 FAM204CP-201ENST00000424489 642 ntBASIC4.98□□□□□ -1.61
LMO4P61968 RPL12P16-201ENST00000431098 498 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AC242426.1-201ENST00000435270 960 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.98□□□□□ -1.61
LMO4P61968 HMGN1P36-201ENST00000446623 298 ntBASIC4.98□□□□□ -1.61
LMO4P61968 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.98□□□□□ -1.61
LMO4P61968 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC4.98□□□□□ -1.61
LMO4P61968 AP002371.1-201ENST00000463604 433 ntBASIC4.98□□□□□ -1.61
LMO4P61968 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms