Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 RNA5SP474-201ENST00000391234 90 ntBASIC6□□□□□ -1.45
CLRN1P58418 HMGB1P10-201ENST00000395823 563 ntBASIC6□□□□□ -1.45
CLRN1P58418 HMGB1P13-201ENST00000406019 642 ntBASIC6□□□□□ -1.45
CLRN1P58418 RNU4-22P-201ENST00000411058 166 ntBASIC6□□□□□ -1.45
CLRN1P58418 RPLP1P10-201ENST00000413972 339 ntBASIC6□□□□□ -1.45
CLRN1P58418 LUZP4P1-201ENST00000415420 344 ntBASIC6□□□□□ -1.45
CLRN1P58418 AL713922.1-201ENST00000416477 747 ntBASIC6□□□□□ -1.45
CLRN1P58418 PPIAP23-201ENST00000420099 497 ntBASIC6□□□□□ -1.45
CLRN1P58418 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLRN1P58418 USP9YP11-201ENST00000427537 717 ntBASIC6□□□□□ -1.45
CLRN1P58418 AL592114.2-201ENST00000440142 532 ntBASIC6□□□□□ -1.45
CLRN1P58418 PMS2P9-201ENST00000441237 515 ntBASIC6□□□□□ -1.45
CLRN1P58418 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 RPL23AP28-201ENST00000448062 470 ntBASIC6□□□□□ -1.45
CLRN1P58418 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 Z95152.1-201ENST00000453556 656 ntBASIC6□□□□□ -1.45
CLRN1P58418 AL445669.2-201ENST00000454425 421 ntBASIC6□□□□□ -1.45
CLRN1P58418 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLRN1P58418 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6□□□□□ -1.45
CLRN1P58418 RN7SL143P-201ENST00000496780 297 ntBASIC6□□□□□ -1.45
CLRN1P58418 AC105391.1-201ENST00000503155 1045 ntBASIC6□□□□□ -1.45
CLRN1P58418 AC010486.2-201ENST00000505572 483 ntBASIC6□□□□□ -1.45
CLRN1P58418 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6□□□□□ -1.45
CLRN1P58418 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 AP005902.2-201ENST00000518393 307 ntBASIC6□□□□□ -1.45
CLRN1P58418 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 AC140063.1-201ENST00000541343 259 ntBASIC6□□□□□ -1.45
CLRN1P58418 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 RN7SL131P-201ENST00000579043 256 ntBASIC6□□□□□ -1.45
CLRN1P58418 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6□□□□□ -1.45
CLRN1P58418 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6□□□□□ -1.45
CLRN1P58418 PLEKHA3P1-201ENST00000598554 894 ntBASIC6□□□□□ -1.45
CLRN1P58418 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 AL590032.1-201ENST00000604920 252 ntBASIC6□□□□□ -1.45
CLRN1P58418 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 AC245008.1-201ENST00000608123 476 ntBASIC6□□□□□ -1.45
CLRN1P58418 AC093635.1-201ENST00000609028 555 ntBASIC6□□□□□ -1.45
CLRN1P58418 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6□□□□□ -1.45
CLRN1P58418 AL354718.1-201ENST00000619764 589 ntBASIC6□□□□□ -1.45
CLRN1P58418 SAMM50P1-201ENST00000455403 1399 ntBASIC6□□□□□ -1.45
CLRN1P58418 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6□□□□□ -1.45
CLRN1P58418 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 AL513185.3-201ENST00000433335 1300 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.99□□□□□ -1.45
CLRN1P58418 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 AL031651.1-201ENST00000615357 1438 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC079298.1-201ENST00000625026 1619 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
CLRN1P58418 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 RACGAP1P-201ENST00000550663 1879 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CLRN1P58418 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLRN1P58418 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLRN1P58418 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AL139135.1-201ENST00000412675 209 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 XKRYP4-201ENST00000414395 483 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 BTF3P9-201ENST00000418784 283 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 MTCYBP7-201ENST00000419540 1134 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 PNRC2P1-201ENST00000423940 420 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 FABP5P2-201ENST00000439042 408 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 SNRPBP1-201ENST00000443634 282 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 XKRYP5-201ENST00000449659 483 ntBASIC5.99□□□□□ -1.45
CLRN1P58418 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.99□□□□□ -1.45
CLRN1P58418 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms