Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 TMSB4XP2-201ENST00000335179 210 ntBASIC5.63□□□□□ -1.51
RFC3P40938 FAM32BP-201ENST00000344033 333 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC3P40938 RNA5SP510-201ENST00000364697 99 ntBASIC5.63□□□□□ -1.51
RFC3P40938 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFC3P40938 RPS7P8-201ENST00000418311 581 ntBASIC5.63□□□□□ -1.51
RFC3P40938 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC3P40938 MORF4-201ENST00000447135 971 ntBASIC5.63□□□□□ -1.51
RFC3P40938 CST12P-201ENST00000457644 362 ntBASIC5.63□□□□□ -1.51
RFC3P40938 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 LSM3P4-201ENST00000502948 309 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC114781.3-201ENST00000512083 142 ntBASIC5.63□□□□□ -1.51
RFC3P40938 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC3P40938 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RFC3P40938 AC068305.2-201ENST00000550567 1205 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 LINC00556-201ENST00000569603 412 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC233702.7-202ENST00000582941 211 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC027229.1-201ENST00000583887 253 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 AC024884.1-201ENST00000620583 399 ntBASIC5.63□□□□□ -1.51
RFC3P40938 FO681491.1-202ENST00000623392 737 ntBASIC5.63□□□□□ -1.51
RFC3P40938 OR7A1P-202ENST00000641542 1158 ntBASIC5.63□□□□□ -1.51
RFC3P40938 AC008691.1-209ENST00000642094 814 ntBASIC5.63□□□□□ -1.51
RFC3P40938 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC3P40938 AL731556.1-201ENST00000394628 3711 ntBASIC5.63□□□□□ -1.51
RFC3P40938 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC3P40938 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RFC3P40938 AC087516.1-201ENST00000561236 2428 ntBASIC5.63□□□□□ -1.51
RFC3P40938 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 AL049634.1-201ENST00000453770 1720 ntBASIC5.62□□□□□ -1.51
RFC3P40938 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 AC024651.2-201ENST00000562480 2098 ntBASIC5.62□□□□□ -1.51
RFC3P40938 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 SNORA43.1-201ENST00000364863 140 ntBASIC5.62□□□□□ -1.51
RFC3P40938 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 HMGN1P20-201ENST00000411849 300 ntBASIC5.62□□□□□ -1.51
RFC3P40938 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 AC090958.1-201ENST00000511122 351 ntBASIC5.62□□□□□ -1.51
RFC3P40938 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.62□□□□□ -1.51
RFC3P40938 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 RNA5SP434-201ENST00000516647 121 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 NANOGNBP2-201ENST00000544753 553 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AC073916.1-201ENST00000545095 130 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.62□□□□□ -1.51
RFC3P40938 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.62□□□□□ -1.51
RFC3P40938 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 AC008521.2-201ENST00000591021 259 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AC108865.2-201ENST00000606881 432 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC3P40938 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 AC119674.1-202ENST00000641333 1860 ntBASIC5.62□□□□□ -1.51
RFC3P40938 AP001541.1-201ENST00000623322 1904 ntBASIC5.62□□□□□ -1.51
RFC3P40938 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RFC3P40938 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC3P40938 AC022325.1-201ENST00000502748 2199 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms