Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 AL121579.2-201ENST00000555466 590 ntBASIC6.69□□□□□ -1.34
BDNFP23560 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 AC026826.3-201ENST00000561747 158 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 GLYATL1P2-202ENST00000588046 902 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC124916.2-201ENST00000604416 224 ntBASIC6.69□□□□□ -1.34
BDNFP23560 CYCSP1-201ENST00000604815 315 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AL513218.1-201ENST00000606527 391 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC007620.3-201ENST00000608131 497 ntBASIC6.69□□□□□ -1.34
BDNFP23560 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 AC007114.2-201ENST00000576014 4281 ntBASIC6.69□□□□□ -1.34
BDNFP23560 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 AP000866.6-201ENST00000638898 3579 ntBASIC6.69□□□□□ -1.34
BDNFP23560 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.69□□□□□ -1.34
BDNFP23560 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 RBPJP2-201ENST00000618187 1444 ntBASIC6.68□□□□□ -1.34
BDNFP23560 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 RNU6-1251P-201ENST00000364502 107 ntBASIC6.68□□□□□ -1.34
BDNFP23560 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
BDNFP23560 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
BDNFP23560 RNA5SP115-201ENST00000411160 107 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.68□□□□□ -1.34
BDNFP23560 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 AC113412.1-201ENST00000425840 504 ntBASIC6.68□□□□□ -1.34
BDNFP23560 RPS7P14-201ENST00000426405 583 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AL354707.3-201ENST00000427308 331 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.68□□□□□ -1.34
BDNFP23560 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.68□□□□□ -1.34
BDNFP23560 AC104629.2-201ENST00000468627 598 ntBASIC6.68□□□□□ -1.34
BDNFP23560 OR9N1P-201ENST00000491296 333 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AP002453.1-201ENST00000492327 668 ntBASIC6.68□□□□□ -1.34
BDNFP23560 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.68□□□□□ -1.34
BDNFP23560 SUMO2P19-201ENST00000518920 295 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AC022784.5-201ENST00000522241 437 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AC109635.6-201ENST00000525487 1113 ntBASIC6.68□□□□□ -1.34
BDNFP23560 TRAV11-201ENST00000539512 339 ntBASIC6.68□□□□□ -1.34
BDNFP23560 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 AC006512.2-201ENST00000543250 486 ntBASIC6.68□□□□□ -1.34
BDNFP23560 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
BDNFP23560 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.68□□□□□ -1.34
BDNFP23560 AC134669.1-201ENST00000581275 672 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.68□□□□□ -1.34
BDNFP23560 AL391597.1-201ENST00000618707 694 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AP001052.1-201ENST00000626421 99 ntBASIC6.68□□□□□ -1.34
BDNFP23560 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
BDNFP23560 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BDNFP23560 AL033543.1-201ENST00000623440 13454 ntBASIC6.68□□□□□ -1.34
BDNFP23560 AC007342.9-201ENST00000623877 1385 ntBASIC6.68□□□□□ -1.34
BDNFP23560 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.68□□□□□ -1.34
BDNFP23560 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.67□□□□□ -1.34
BDNFP23560 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.67□□□□□ -1.34
BDNFP23560 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 LINC02019-201ENST00000608605 2060 ntBASIC6.67□□□□□ -1.34
BDNFP23560 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.67□□□□□ -1.34
BDNFP23560 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 AC105235.1-201ENST00000623208 1816 ntBASIC6.67□□□□□ -1.34
BDNFP23560 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
BDNFP23560 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.67□□□□□ -1.34
BDNFP23560 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.67□□□□□ -1.34
BDNFP23560 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
BDNFP23560 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 AC123769.1-201ENST00000530992 3192 ntBASIC6.67□□□□□ -1.34
BDNFP23560 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
BDNFP23560 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BDNFP23560 FAM32BP-201ENST00000344033 333 ntBASIC6.67□□□□□ -1.34
BDNFP23560 RNA5SP346-201ENST00000363541 121 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms