Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFRAP16234 ICE2P1-201ENST00000512800 1849 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AL442128.2-201ENST00000620246 1824 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 AC119674.1-202ENST00000641333 1860 ntBASIC6.38□□□□□ -1.39
PDGFRAP16234 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFRAP16234 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFRAP16234 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 SAMMSON-210ENST00000641260 1308 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 RNU1-134P-201ENST00000362935 165 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 RNA5SP433-201ENST00000364491 114 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL132875.1-201ENST00000403623 949 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL121835.1-201ENST00000404250 354 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 RNU4-64P-201ENST00000410795 131 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 PTCD2P2-201ENST00000415579 1095 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC130360.1-201ENST00000425489 1117 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC115283.1-201ENST00000427353 400 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC002069.1-201ENST00000429649 1159 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL731534.1-201ENST00000434711 269 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFRAP16234 SEPT14P12-201ENST00000442280 560 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 RPL5P10-201ENST00000445207 894 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 ZNF619P1-201ENST00000446539 752 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 PPIAP7-201ENST00000454070 489 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 Z83838.1-202ENST00000456225 839 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL445687.2-201ENST00000458156 728 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC124945.1-201ENST00000485133 188 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL035690.1-201ENST00000490892 383 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC112184.1-201ENST00000505179 312 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 CR383658.1-201ENST00000514609 734 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AC130365.2-201ENST00000525882 1201 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AP000620.1-201ENST00000527147 504 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFRAP16234 MIR132-201ENST00000591554 101 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC073333.2-201ENST00000603589 769 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFRAP16234 AC073389.3-201ENST00000609434 935 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 FAM27E2-201ENST00000619668 403 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AP003400.2-201ENST00000624036 666 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 AL662795.2-201ENST00000624252 3706 ntBASIC6.37□□□□□ -1.39
PDGFRAP16234 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFRAP16234 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFRAP16234 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC016583.1-201ENST00000624221 2431 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFRAP16234 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 FUNDC2P3-201ENST00000334716 533 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PDGFRAP16234 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC069154.1-201ENST00000432914 542 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 PNKDP1-201ENST00000435914 430 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AC023141.3-201ENST00000436698 278 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 AC110602.1-201ENST00000437414 318 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.36□□□□□ -1.39
PDGFRAP16234 PPP1R11P1-201ENST00000486095 376 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 RPL23AP40-201ENST00000487630 390 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 PFN1P8-201ENST00000497012 543 ntBASIC6.36□□□□□ -1.39
PDGFRAP16234 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFRAP16234 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFRAP16234 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PDGFRAP16234 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.36□□□□□ -1.39
PDGFRAP16234 RN7SKP248-201ENST00000516278 305 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms