Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.72□□□□□ -1.33
COL6A2P12110 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 AC022034.1-201ENST00000512867 2156 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL6A2P12110 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL6A2P12110 AL662795.2-201ENST00000624252 3706 ntBASIC6.72□□□□□ -1.33
COL6A2P12110 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL6A2P12110 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
COL6A2P12110 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL6A2P12110 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL6A2P12110 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.71□□□□□ -1.33
COL6A2P12110 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL6A2P12110 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
COL6A2P12110 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.71□□□□□ -1.33
COL6A2P12110 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL6A2P12110 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL6A2P12110 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.71□□□□□ -1.33
COL6A2P12110 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.71□□□□□ -1.33
COL6A2P12110 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 AL512329.1-201ENST00000404600 1592 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 AC132825.1-201ENST00000463573 2247 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL6A2P12110 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 RNU4-68P-201ENST00000364314 141 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 SNORA70.3-201ENST00000365075 132 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 U3.14-201ENST00000365363 227 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 RN7SKP236-201ENST00000410635 284 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 RNU4-22P-201ENST00000411058 166 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AL449283.1-202ENST00000418249 604 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 EIF4A1P1-201ENST00000420241 934 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC134879.1-201ENST00000426062 394 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC239367.3-201ENST00000428996 814 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 USP9YP28-201ENST00000435142 589 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AL451136.1-201ENST00000435399 325 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC000041.1-201ENST00000439655 175 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 RPL29P7-201ENST00000440227 457 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 AC008280.2-201ENST00000455473 307 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 SNORA35.1-201ENST00000458908 128 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AL928654.1-201ENST00000476081 354 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.71□□□□□ -1.34
COL6A2P12110 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 SCARNA18.2-201ENST00000516882 84 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 RNU6-1028P-201ENST00000517164 93 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 IGHV3-57-201ENST00000520143 280 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL6A2P12110 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.71□□□□□ -1.34
COL6A2P12110 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC016180.1-201ENST00000567945 403 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC106785.4-201ENST00000569492 412 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 CTSLP2-201ENST00000580501 394 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC011447.2-201ENST00000592921 283 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 AL953862.2-201ENST00000603089 820 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC005070.2-201ENST00000604391 260 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC092960.1-201ENST00000604762 351 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC079610.2-201ENST00000604818 690 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.71□□□□□ -1.34
COL6A2P12110 AC245407.2-201ENST00000614199 451 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 MIR6731-201ENST00000614863 72 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 RMST_5.1-201ENST00000618704 126 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC012629.3-201ENST00000623397 328 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC017037.3-201ENST00000625016 472 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.71□□□□□ -1.34
COL6A2P12110 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.71□□□□□ -1.34
COL6A2P12110 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 AL022393.1-201ENST00000625142 1677 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 AC093297.3-201ENST00000607056 2517 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 OR5M2P-202ENST00000641241 4242 ntBASIC6.71□□□□□ -1.34
COL6A2P12110 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL6A2P12110 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.7□□□□□ -1.34
COL6A2P12110 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 LCOR-201ENST00000286067 4542 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 MTCO1P25-201ENST00000414449 1799 ntBASIC6.7□□□□□ -1.34
COL6A2P12110 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL6A2P12110 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL6A2P12110 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms