Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.51□□□□□ -1.53
OPN1SWP03999 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 AC073333.2-201ENST00000603589 769 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 AC009237.12-201ENST00000604755 742 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 AL512652.1-201ENST00000619006 500 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 MIR6823-201ENST00000622118 61 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN1SWP03999 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 AC123769.1-201ENST00000530992 3192 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN1SWP03999 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 AC027279.4-201ENST00000624371 2072 ntBASIC5.51□□□□□ -1.53
OPN1SWP03999 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
OPN1SWP03999 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
OPN1SWP03999 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC025470.1-201ENST00000510053 2032 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 RNU1-134P-201ENST00000362935 165 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN1SWP03999 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
OPN1SWP03999 PSMA6P1-201ENST00000400275 741 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 SSR1P1-201ENST00000407630 814 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AL139805.1-201ENST00000407837 289 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 RPL7AP14-201ENST00000424041 802 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC099677.3-201ENST00000427081 395 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LINC00328-2P-201ENST00000436585 219 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 FTLP8-201ENST00000446770 267 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AC097359.1-201ENST00000447946 463 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC099670.1-201ENST00000455141 783 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 YRDCP3-201ENST00000456507 480 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.5□□□□□ -1.53
OPN1SWP03999 RN7SL284P-201ENST00000498823 275 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 HMGN1P17-201ENST00000513734 295 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC136777.2-201ENST00000522979 358 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC036111.2-201ENST00000533247 901 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 BTG1P1-201ENST00000540396 508 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC126615.2-201ENST00000553003 515 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN1SWP03999 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 MRPS21P8-201ENST00000569196 235 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AC090826.1-203ENST00000569235 490 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AL133481.2-203ENST00000607558 139 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 AL357562.1-201ENST00000624911 609 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 NCOA4P2-201ENST00000340589 1813 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
OPN1SWP03999 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
OPN1SWP03999 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN1SWP03999 AL121839.2-201ENST00000565058 6943 ntBASIC5.5□□□□□ -1.53
OPN1SWP03999 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN1SWP03999 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.49□□□□□ -1.53
OPN1SWP03999 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
OPN1SWP03999 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
OPN1SWP03999 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
OPN1SWP03999 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
OPN1SWP03999 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
OPN1SWP03999 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
OPN1SWP03999 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
OPN1SWP03999 MIR188-201ENST00000385034 86 ntBASIC5.49□□□□□ -1.53
OPN1SWP03999 AL354868.1-201ENST00000417077 482 ntBASIC5.49□□□□□ -1.53
OPN1SWP03999 Z82198.3-201ENST00000421145 199 ntBASIC5.49□□□□□ -1.53
OPN1SWP03999 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.49□□□□□ -1.53
OPN1SWP03999 AK3P5-201ENST00000432033 519 ntBASIC5.49□□□□□ -1.53
OPN1SWP03999 SUMO2P8-201ENST00000434672 286 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms