Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.02□□□□□ -1.45
LDLRP01130 AC004656.1-201ENST00000568479 4951 ntBASIC6.02□□□□□ -1.45
LDLRP01130 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LDLRP01130 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LDLRP01130 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
LDLRP01130 AC092692.1-201ENST00000623625 2595 ntBASIC6.02□□□□□ -1.45
LDLRP01130 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 AL591135.1-201ENST00000401578 5914 ntBASIC6.01□□□□□ -1.45
LDLRP01130 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 AL359694.1-201ENST00000403247 604 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 IPPKP1-201ENST00000422501 768 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC092967.1-201ENST00000449016 481 ntBASIC6.01□□□□□ -1.45
LDLRP01130 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 RARRES2P3-201ENST00000457739 473 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 RN7SL254P-201ENST00000460609 284 ntBASIC6.01□□□□□ -1.45
LDLRP01130 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 OR52H2P-201ENST00000514607 902 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 IGKV1D-22-201ENST00000518953 324 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
LDLRP01130 AC004232.2-201ENST00000574245 821 ntBASIC6.01□□□□□ -1.45
LDLRP01130 MIR3614-201ENST00000581261 86 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.01□□□□□ -1.45
LDLRP01130 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC067773.1-201ENST00000603284 1094 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC087468.1-201ENST00000604365 630 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC008555.7-201ENST00000605008 583 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AL021368.3-201ENST00000607119 578 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.01□□□□□ -1.45
LDLRP01130 AC109309.2-201ENST00000612597 332 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AL096712.1-201ENST00000614561 159 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC241377.1-201ENST00000619797 406 ntBASIC6.01□□□□□ -1.45
LDLRP01130 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 AC116667.2-201ENST00000641075 823 ntBASIC6.01□□□□□ -1.45
LDLRP01130 AC140479.2-201ENST00000421567 3130 ntBASIC6.01□□□□□ -1.45
LDLRP01130 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
LDLRP01130 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.01□□□□□ -1.45
LDLRP01130 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LDLRP01130 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6□□□□□ -1.45
LDLRP01130 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6□□□□□ -1.45
LDLRP01130 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6□□□□□ -1.45
LDLRP01130 PPIAP24-201ENST00000328558 471 ntBASIC6□□□□□ -1.45
LDLRP01130 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6□□□□□ -1.45
LDLRP01130 RN7SKP69-201ENST00000365390 305 ntBASIC6□□□□□ -1.45
LDLRP01130 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6□□□□□ -1.45
LDLRP01130 AC004386.1-201ENST00000393214 761 ntBASIC6□□□□□ -1.45
LDLRP01130 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 AC016027.5-201ENST00000427227 210 ntBASIC6□□□□□ -1.45
LDLRP01130 AC104843.2-201ENST00000427666 297 ntBASIC6□□□□□ -1.45
LDLRP01130 UBBP5-201ENST00000446970 266 ntBASIC6□□□□□ -1.45
LDLRP01130 HMGB1P7-201ENST00000450921 612 ntBASIC6□□□□□ -1.45
LDLRP01130 RPL26P30-201ENST00000453533 435 ntBASIC6□□□□□ -1.45
LDLRP01130 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6□□□□□ -1.45
LDLRP01130 AC090058.1-201ENST00000498788 435 ntBASIC6□□□□□ -1.45
LDLRP01130 AP001960.1-201ENST00000506494 658 ntBASIC6□□□□□ -1.45
LDLRP01130 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6□□□□□ -1.45
LDLRP01130 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6□□□□□ -1.45
LDLRP01130 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6□□□□□ -1.45
LDLRP01130 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms