Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC040174.2-201ENST00000602701 465 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AP001823.1-201ENST00000604056 1003 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC022106.1-201ENST00000612834 766 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC074276.2-201ENST00000619891 348 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 MIR6813-201ENST00000621638 56 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AL356490.1-201ENST00000623079 479 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX2-2O95096 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC005261.2-201ENST00000593427 4258 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
NKX2-2O95096 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NKX2-2O95096 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NKX2-2O95096 AC114876.1-201ENST00000490962 1366 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NKX2-2O95096 MTHFD2P5-201ENST00000320415 844 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 RN7SKP144-201ENST00000411108 279 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 AC099782.1-201ENST00000425889 474 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AL390879.2-203ENST00000426943 1121 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 IGLV3-4-201ENST00000432300 244 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR3D1P-201ENST00000438288 955 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AL590004.3-202ENST00000445883 451 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 RN7SL836P-201ENST00000476140 296 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR7E22P-201ENST00000478335 1035 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 STRADBP1-201ENST00000478954 1281 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 PCNAP1-201ENST00000505363 709 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 SNX18P25-201ENST00000510539 758 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 ZNF519P4-201ENST00000514008 125 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 SETP12-201ENST00000514068 805 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 RFPL4AP3-201ENST00000515267 345 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.72□□□□□ -1.49
NKX2-2O95096 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
NKX2-2O95096 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.72□□□□□ -1.49
NKX2-2O95096 AC008555.7-201ENST00000605008 583 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 HMGB1P51-201ENST00000605166 638 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 RPSAP75-201ENST00000605848 301 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 RNU6-84P-201ENST00000607737 102 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AL133445.2-201ENST00000611191 527 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AL109620.1-201ENST00000618738 1197 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 AC018659.2-201ENST00000624690 715 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.72□□□□□ -1.49
NKX2-2O95096 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 DDX18P6-201ENST00000450119 1997 ntBASIC5.72□□□□□ -1.49
NKX2-2O95096 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.72□□□□□ -1.49
NKX2-2O95096 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
NKX2-2O95096 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.72□□□□□ -1.49
NKX2-2O95096 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NKX2-2O95096 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-2O95096 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-2O95096 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-2O95096 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NKX2-2O95096 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
NKX2-2O95096 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
NKX2-2O95096 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.71□□□□□ -1.5
NKX2-2O95096 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX2-2O95096 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms