Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC009501.3-201ENST00000605001 1352 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 SNX18P3-202ENST00000565670 1750 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXN3O00409 CASC19-246ENST00000641625 1606 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXN3O00409 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 ST13P16-201ENST00000401760 781 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 OSTCP4-201ENST00000424397 449 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC023141.6-201ENST00000429418 337 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC112492.2-201ENST00000432774 1030 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 SOCS5P1-201ENST00000440415 949 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AC064862.5-201ENST00000440618 334 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 OR4D12P-201ENST00000509361 911 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC093816.1-201ENST00000515076 913 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.69□□□□□ -1.34
FOXN3O00409 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 RPA2P3-201ENST00000533268 770 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXN3O00409 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.69□□□□□ -1.34
FOXN3O00409 AC012368.3-201ENST00000604190 219 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AL138693.1-201ENST00000622219 129 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 AC003992.1-201ENST00000635364 557 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 OR7A1P-202ENST00000641542 1158 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.69□□□□□ -1.34
FOXN3O00409 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
FOXN3O00409 AP000547.3-204ENST00000588548 2523 ntBASIC6.69□□□□□ -1.34
FOXN3O00409 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 FUNDC2P3-201ENST00000334716 533 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 RNU6-40P-201ENST00000384254 107 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXN3O00409 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL133260.1-201ENST00000405720 405 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC079922.1-201ENST00000443291 359 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
FOXN3O00409 BUD31P2-201ENST00000449374 300 ntBASIC6.68□□□□□ -1.34
FOXN3O00409 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.68□□□□□ -1.34
FOXN3O00409 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.68□□□□□ -1.34
FOXN3O00409 AL133351.3-201ENST00000454998 193 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms