Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 AL731532.1-201ENST00000623972 4236 ntBASIC5.66□□□□□ -1.5
NPIPA2E9PIF3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AL137141.1-201ENST00000624622 4836 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AL161912.4-201ENST00000623889 2468 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 RN7SKP121-201ENST00000410842 305 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 IPPKP1-201ENST00000422501 768 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC244033.1-201ENST00000426826 870 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 OR13K1P-201ENST00000444577 975 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 GOLGA5P1-201ENST00000507317 980 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 ASNSP4-201ENST00000511103 447 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC022616.2-201ENST00000523185 300 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC079905.1-201ENST00000549280 475 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 MIR4701-201ENST00000583094 63 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC009237.12-201ENST00000604755 742 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AL096712.1-201ENST00000614561 159 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC004801.6-201ENST00000616571 978 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 AC004836.1-201ENST00000623032 634 ntBASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.65□□□□□ -1.5
NPIPA2E9PIF3 LINC01616-201ENST00000561816 2280 ntBASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 AL354854.1-201ENST00000455940 1363 ntBASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
NPIPA2E9PIF3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC018717.1-201ENST00000457712 1505 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL133243.2-201ENST00000610331 1621 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 RNA5SP110-201ENST00000362638 115 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 RNU6-167P-201ENST00000384292 106 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 MIR323B-201ENST00000385269 82 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 RPS7P14-201ENST00000426405 583 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL121578.1-201ENST00000428051 892 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AL353662.1-201ENST00000439099 327 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 PPIAP27-201ENST00000453800 265 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 LSM3P4-201ENST00000502948 309 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 RN7SKP238-201ENST00000516483 249 ntBASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.64□□□□□ -1.51
NPIPA2E9PIF3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms