Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KHDC1P1-201ENST00000511053 508 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MIR4420-201ENST00000583944 77 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 DYNLL1P1-201ENST00000595442 269 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AC093388.1-201ENST00000609166 430 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 MIR6811-201ENST00000620409 58 ntBASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RHBDD3Q9Y3P4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.34□□□□□ -1.56
RHBDD3Q9Y3P4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC232271.1-201ENST00000602455 2715 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AL137141.1-201ENST00000624622 4836 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RNU1-49P-201ENST00000363468 159 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RNA5SP346-201ENST00000363541 121 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AL133260.1-201ENST00000405720 405 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RNU2-22P-201ENST00000411266 212 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 PPIAP10-201ENST00000438675 458 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SNRPCP11-201ENST00000492453 205 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AP001858.2-201ENST00000536213 601 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AL049779.3-201ENST00000557141 606 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC009237.12-201ENST00000604755 742 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC022106.1-201ENST00000612834 766 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RHBDD3Q9Y3P4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AC239868.2-201ENST00000564237 4527 ntBASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RHBDD3Q9Y3P4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms