Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RNU6-1119P-201ENST00000384349 108 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 MIR152-201ENST00000385212 87 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP85-201ENST00000411349 318 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 GSTA10P-201ENST00000412182 576 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 CDK8P2-201ENST00000415020 547 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 OR4K6P-201ENST00000416478 897 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 CDC42P6-201ENST00000421246 576 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RPSAP32-201ENST00000432681 526 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 NDUFS5P5-201ENST00000437256 321 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RPL5P32-201ENST00000454085 879 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC026348.1-201ENST00000462549 1053 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC104339.1-201ENST00000465478 348 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 MTCO3P38-201ENST00000468910 766 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC104763.1-201ENST00000475274 360 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 BNIP3P41-201ENST00000503774 571 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RN7SKP233-201ENST00000517005 110 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 CASC11-203ENST00000519071 791 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 ELOCP28-201ENST00000590044 317 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 AC139769.3-201ENST00000618383 175 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RPSAP68-201ENST00000625020 438 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 MAPK10-377ENST00000642006 2752 ntBASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
ZC3H4Q9UPT8 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
ZC3H4Q9UPT8 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 TNFSF15-201ENST00000374044 2789 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ATP5F1P4-201ENST00000397288 746 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AL391419.1-201ENST00000398901 1275 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 GSTA12P-201ENST00000402398 508 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 RNU6-920P-201ENST00000410926 92 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 CCDC58P2-201ENST00000417131 366 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC005178.1-201ENST00000508392 440 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC010285.3-201ENST00000511668 676 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC124293.1-201ENST00000530034 493 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AP002963.1-201ENST00000530590 184 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 HNRNPCP1-201ENST00000556181 766 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AADACP1-206ENST00000561502 1193 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 MTCO1P28-201ENST00000574177 1528 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 MTND1P15-201ENST00000579262 949 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC006967.3-201ENST00000594086 1093 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AL451085.1-201ENST00000604546 690 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC006270.3-201ENST00000605967 1036 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 DLEU2_1.1-201ENST00000612089 120 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 DLEU2_1.2-201ENST00000614667 120 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 SEPT14P19-203ENST00000633205 211 ntBASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC8.83□□□□□ -1
ZC3H4Q9UPT8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms