Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC093325.1-201ENST00000508378 326 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 MIR5010-201ENST00000582846 120 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AL035461.2-201ENST00000619201 524 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC004232.3-201ENST00000622977 525 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC073862.4-201ENST00000622982 854 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 MAPK10-270ENST00000641102 3538 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AL355578.1-201ENST00000607405 1328 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 AC119674.1-204ENST00000641348 1343 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 CCDC150P1-201ENST00000537123 2215 ntBASIC6.99□□□□□ -1.29
PPARGC1AQ9UBK2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 RPL24P4-201ENST00000326586 421 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 UBBP1-201ENST00000392399 473 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 MIR541-201ENST00000401360 84 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 MTCO3P4-201ENST00000419236 787 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 E2F6P1-201ENST00000428850 745 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC239367.3-201ENST00000428996 814 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 E2F6P3-201ENST00000441743 743 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC063955.1-201ENST00000462872 685 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 CBX1P5-201ENST00000475330 559 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 RN7SL267P-201ENST00000485107 261 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 RN7SL655P-201ENST00000486087 298 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC117395.1-201ENST00000487390 403 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 RN7SL350P-201ENST00000492591 299 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC147055.3-201ENST00000510547 851 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 NPM1P21-201ENST00000513394 762 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC010442.1-201ENST00000515583 816 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 SNORA19.3-201ENST00000516165 130 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 IGKV2D-38-201ENST00000518423 240 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 SNRPCP6-201ENST00000528310 210 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 OSBPL9P5-201ENST00000542581 171 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC008147.3-201ENST00000548666 354 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC104229.1-201ENST00000561364 255 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AGGF1P6-201ENST00000569213 976 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 RPS4XP21-201ENST00000603814 750 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 MIR6774-201ENST00000614651 70 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 AC010333.3-201ENST00000615100 402 ntBASIC6.98□□□□□ -1.29
PPARGC1AQ9UBK2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms