Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 RN7SKP55-201ENST00000364888 307 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 FAM204BP-201ENST00000369171 701 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 RNA5SP53-201ENST00000391299 120 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL451061.1-201ENST00000407887 862 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 RN7SKP254-201ENST00000410685 310 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 UQCRHP1-204ENST00000424609 274 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC097721.1-201ENST00000427150 1253 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL022331.1-201ENST00000429025 477 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC005189.1-201ENST00000431286 310 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL354941.1-201ENST00000438600 464 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 MTCYBP34-201ENST00000439552 670 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC092641.1-201ENST00000440229 772 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 GTF2IP14-201ENST00000441415 586 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL356133.1-201ENST00000444762 372 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 TPMTP4-201ENST00000450749 678 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 SLAMF6P1-201ENST00000451067 602 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 RBMY2EP-202ENST00000456360 940 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 TREML3P-201ENST00000457327 501 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 PPP1R2P6-201ENST00000478565 588 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC113347.3-201ENST00000509113 148 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 PTTG3P-201ENST00000521862 606 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 HNRNPCP1-201ENST00000556181 766 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 DUXAP1-201ENST00000556632 463 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC125494.3-201ENST00000602759 455 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC005479.3-201ENST00000602790 431 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC100767.2-201ENST00000604840 693 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC018690.1-201ENST00000608144 626 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC026108.1-201ENST00000635444 547 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 MFSD8-218ENST00000641186 4448 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC005614.1-201ENST00000598952 3653 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CNTN3Q9P232 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
CNTN3Q9P232 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.71□□□□□ -1.17
CNTN3Q9P232 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.17
CNTN3Q9P232 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
CNTN3Q9P232 AC011592.1-201ENST00000624647 3634 ntBASIC7.71□□□□□ -1.17
CNTN3Q9P232 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CNTN3Q9P232 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.71□□□□□ -1.17
CNTN3Q9P232 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.71□□□□□ -1.17
CNTN3Q9P232 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CNTN3Q9P232 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC119674.1-202ENST00000641333 1860 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 Y_RNA.553-201ENST00000384670 102 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL663109.1-201ENST00000411498 844 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL357520.1-201ENST00000441557 453 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 HMGB1P48-201ENST00000446155 598 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 RPL7L1P3-201ENST00000455249 689 ntBASIC7.71□□□□□ -1.18
CNTN3Q9P232 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.71□□□□□ -1.18
CNTN3Q9P232 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms