Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL512649.1-201ENST00000428997 581 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ARL5AP2-201ENST00000444698 533 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 UOX-201ENST00000471089 899 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC007537.2-201ENST00000472093 511 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC023050.1-201ENST00000498198 304 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC093770.1-201ENST00000511559 571 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 PTP4A1P4-201ENST00000512479 322 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AP001803.1-201ENST00000525668 147 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 HPRT1P3-201ENST00000539521 576 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ARL2BPP2-201ENST00000550907 489 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL133457.1-201ENST00000564251 987 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL096855.2-201ENST00000605785 369 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL020991.1-201ENST00000612314 373 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 FTSJ3-201ENST00000427159 3559 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AP000641.1-201ENST00000531988 1639 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC136428.3-201ENST00000566387 1990 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 Z97200.1-201ENST00000606154 2045 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC010894.1-201ENST00000313760 361 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 IL6STP1-201ENST00000346911 1020 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNU6-252P-201ENST00000363232 107 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP85-201ENST00000365378 119 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNU6-1005P-201ENST00000384519 107 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP53-201ENST00000391299 120 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SNORA2C-201ENST00000408564 137 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RN7SKP144-201ENST00000411108 279 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 YWHAZP3-201ENST00000415292 738 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AL160175.1-201ENST00000428124 247 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 PSPHP1-201ENST00000450062 261 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RPL7P32-201ENST00000457119 744 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 FTH1P2-201ENST00000466086 412 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC040975.1-201ENST00000472104 316 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 MTCO1P30-201ENST00000515244 580 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP518-201ENST00000515957 119 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 RNU6-794P-201ENST00000517261 64 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 IGHVIII-13-1-201ENST00000517613 291 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 NATP-201ENST00000523491 878 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SMARCE1P4-201ENST00000523647 241 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms