Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC007920.2-201ENST00000636210 1973 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
USB1Q9BQ65 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
USB1Q9BQ65 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
USB1Q9BQ65 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 CDY11P-201ENST00000447168 1651 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 OLFM5P-201ENST00000411807 1478 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC074198.1-201ENST00000506546 1397 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC011155.1-201ENST00000316512 456 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 MTCP1-201ENST00000362018 570 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU6-282P-201ENST00000365357 103 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-28P-201ENST00000383861 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-27P-201ENST00000383869 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-1-201ENST00000383925 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNVU1-18-201ENST00000384010 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU6-74P-201ENST00000384235 107 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-2-201ENST00000384278 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-4-201ENST00000384659 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU1-3-201ENST00000384782 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU6-510P-201ENST00000391239 108 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPL5P18-201ENST00000406671 891 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 SNRPFP1-201ENST00000414761 252 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPL17P17-201ENST00000419491 557 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AL358176.2-201ENST00000425769 204 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPS29P3-201ENST00000439929 171 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 CBX1P1-201ENST00000440184 427 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC007237.1-201ENST00000442074 499 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPL26P30-201ENST00000453533 435 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 TUBB4BP2-201ENST00000454125 798 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 MTND5P22-201ENST00000458380 195 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 RPS10P16-201ENST00000483812 496 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC104687.1-201ENST00000485829 412 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC080188.1-201ENST00000491923 567 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
USB1Q9BQ65 RNU6-835P-201ENST00000516974 104 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 SUB1P2-201ENST00000556401 297 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC087639.1-201ENST00000560974 920 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC233702.4-201ENST00000581610 304 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC005758.1-201ENST00000586408 625 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 OR7E19P-202ENST00000589942 844 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC068790.5-201ENST00000602741 355 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AL359999.1-201ENST00000604513 294 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AL355472.4-201ENST00000610233 626 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 U1.40-201ENST00000610976 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 MIR7150-201ENST00000614393 94 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 U1.27-201ENST00000615842 164 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC245505.3-201ENST00000616788 358 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC002401.3-201ENST00000620020 440 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 ALG13-226ENST00000622986 582 ntTSL 2 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
USB1Q9BQ65 AC063952.1-203ENST00000634410 658 ntBASIC7.77□□□□□ -1.17
USB1Q9BQ65 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms