Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CUBNP2-201ENST00000443534 1139 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 TVP23CP2-201ENST00000571473 623 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 MIR3160-1-201ENST00000577972 85 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC010857.1-201ENST00000606398 594 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC006213.6-201ENST00000623722 4179 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AL353625.1-202ENST00000366273 571 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 MIR23B-201ENST00000384832 97 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AL357752.1-201ENST00000412817 349 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC004975.1-201ENST00000428733 208 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 RPA2P3-201ENST00000533268 770 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CYCSP29-201ENST00000533731 318 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 RNU4ATAC-201ENST00000580972 127 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AL162431.4-201ENST00000604674 411 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC093799.2-201ENST00000610062 578 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC011493.1-201ENST00000596753 1632 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC232271.1-201ENST00000602455 2715 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 FAM3C2-201ENST00000312214 681 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 NMD3P2-201ENST00000421815 761 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC239367.2-201ENST00000447309 705 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC234781.3-201ENST00000452540 973 ntBASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 FRY-202ENST00000380250 10688 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 FRY-209ENST00000642040 10697 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL162456.1-201ENST00000634535 2006 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 RNU1-46P-201ENST00000384425 164 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 RNU1-77P-201ENST00000390868 162 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 MIR541-201ENST00000401360 84 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AL138878.2-201ENST00000440581 1241 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC073610.1-201ENST00000489971 396 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC109462.1-201ENST00000491087 368 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC087516.1-201ENST00000561236 2428 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 HSPA8P14-201ENST00000552265 1805 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 AC010733.2-201ENST00000589496 5702 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 RNU4-4P-201ENST00000364588 130 ntBASIC4.84□□□□□ -1.63
CSMD1Q96PZ7 ACOT11-202ENST00000371316 6369 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms