Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 AC092724.1-201ENST00000624623 3397 ntBASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM5Q96HC4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 MTCO1P22-201ENST00000604619 1360 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 SNORA21-201ENST00000362423 132 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 RN7SKP146-201ENST00000410242 334 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 MYL6P5-201ENST00000412707 459 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL096829.1-201ENST00000413677 457 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 KF459542.1-201ENST00000450908 553 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 RPL12P30-201ENST00000488389 499 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CCDC11P1-201ENST00000503137 1162 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC021269.1-201ENST00000526860 705 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL355974.3-201ENST00000617383 467 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AC018717.1-201ENST00000457712 1505 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM5Q96HC4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDLIM5Q96HC4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 RNA5SP375-201ENST00000362975 119 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 MIR188-201ENST00000385034 86 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 RNA5SP156-201ENST00000410250 110 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 RPL35AP31-201ENST00000418340 337 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 CUBNP2-201ENST00000443534 1139 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 TRIM60P16-201ENST00000444048 694 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 AC097359.1-201ENST00000447946 463 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 AC124945.1-201ENST00000485133 188 ntBASIC5.96□□□□□ -1.46
PDLIM5Q96HC4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms