Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 TXNP4-201ENST00000575018 310 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC011497.2-201ENST00000600255 639 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC037198.3-201ENST00000616754 526 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 CASC19-264ENST00000641912 1184 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNED1Q8TER0 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SNED1Q8TER0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.21□□□□□ -1.26
SNED1Q8TER0 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SNED1Q8TER0 LINC01616-201ENST00000561816 2280 ntBASIC7.21□□□□□ -1.26
SNED1Q8TER0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SNED1Q8TER0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 U3.2-201ENST00000362981 210 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 RN7SKP166-201ENST00000410812 305 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 AP000534.2-201ENST00000412729 568 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC006455.6-201ENST00000426192 893 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC083795.1-201ENST00000491760 320 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 OR5M14P-201ENST00000506803 618 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 RN7SKP98-201ENST00000517070 156 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC024589.2-201ENST00000605642 1294 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 MRE11P1-201ENST00000464884 2127 ntBASIC7.2□□□□□ -1.26
SNED1Q8TER0 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SNED1Q8TER0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SNED1Q8TER0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 RNA5SP131-201ENST00000365452 119 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC005297.1-201ENST00000444765 862 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AL022237.1-201ENST00000446663 358 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 RN7SL583P-201ENST00000475692 287 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 CYCSP1-201ENST00000604815 315 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AL445222.1-201ENST00000607259 628 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC068870.2-201ENST00000620635 389 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 MIR8080-201ENST00000622224 89 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC016583.1-201ENST00000624221 2431 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 TMEM75-201ENST00000624314 2165 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
SNED1Q8TER0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNED1Q8TER0 AC005831.1-201ENST00000624384 1697 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 AL592429.1-201ENST00000403909 1473 ntBASIC7.19□□□□□ -1.26
SNED1Q8TER0 MIR585-201ENST00000384887 94 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 RPL35AP24-201ENST00000413846 330 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC099677.3-201ENST00000427081 395 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL139148.1-201ENST00000427122 680 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC017007.3-201ENST00000479865 435 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 EIF4A2P5-201ENST00000529914 499 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL049872.1-201ENST00000556323 322 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC145423.1-201ENST00000605712 336 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 AC116651.1-201ENST00000609724 556 ntBASIC7.18□□□□□ -1.26
SNED1Q8TER0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNED1Q8TER0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms