Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AP001541.1-201ENST00000623322 1904 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC090220.1-201ENST00000593078 1699 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 RPL21P50-201ENST00000417698 477 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 NAP1L4P2-201ENST00000425958 899 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 USP24P1-201ENST00000433802 779 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL390879.1-201ENST00000439143 386 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 RBMY2AP-201ENST00000445405 1157 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 RBMY2CP-201ENST00000448575 1157 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 RBMY2DP-202ENST00000448881 1157 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AP002453.1-201ENST00000492327 668 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 SNX18P24-201ENST00000505249 671 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC090826.1-203ENST00000569235 490 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC027229.1-201ENST00000583887 253 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL136097.3-201ENST00000611097 505 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC069234.4-201ENST00000621276 412 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 AC008691.1-209ENST00000642094 814 ntBASIC5.76□□□□□ -1.49
CCDC71Q8IV32 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC71Q8IV32 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AL359955.1-201ENST00000455242 3275 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC079753.1-201ENST00000623243 3868 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 DHFRP2-201ENST00000414224 547 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC010240.2-201ENST00000445363 1205 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 RNA5SP206-201ENST00000516703 121 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 EIF4EP5-201ENST00000528228 640 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 SETP3-201ENST00000581726 813 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AL365181.4-201ENST00000609800 547 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 MIR6729-201ENST00000618194 65 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC003992.1-201ENST00000635364 557 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 AC116667.2-201ENST00000641075 823 ntBASIC5.75□□□□□ -1.49
CCDC71Q8IV32 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC71Q8IV32 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms