Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS13CQ709C8 AC012618.3-205ENST00000637896 1496 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 RNA5SP123-201ENST00000363244 119 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL133388.1-201ENST00000404509 287 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 COX6CP17-201ENST00000421389 185 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC073264.2-201ENST00000448886 166 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 RPL5P22-201ENST00000480199 884 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC013701.1-201ENST00000522657 465 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC011840.5-201ENST00000582125 771 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL162431.4-201ENST00000604674 411 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL354868.1-201ENST00000417077 482 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC091390.2-201ENST00000432573 374 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 RN7SL354P-201ENST00000469282 294 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC090638.1-201ENST00000498296 909 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 MIR5096-201ENST00000583713 70 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC009163.6-201ENST00000612367 342 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL356317.1-201ENST00000396110 1436 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC011493.1-201ENST00000596753 1632 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 RPL23P2-201ENST00000320371 421 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 RN7SKP6-201ENST00000364795 319 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC092647.3-201ENST00000443044 633 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 OR13K1P-201ENST00000444577 975 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AL590392.1-201ENST00000604960 446 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC245389.2-201ENST00000616023 576 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC242843.1-201ENST00000618702 573 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS13CQ709C8 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS13CQ709C8 AC132825.1-201ENST00000463573 2247 ntBASIC4.64□□□□□ -1.67
VPS13CQ709C8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 HSPA8P14-201ENST00000552265 1805 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 RPL7L1P3-201ENST00000455249 689 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 RPS18P6-201ENST00000476880 458 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC025674.1-201ENST00000507074 324 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC078878.1-201ENST00000539832 958 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AL008638.3-201ENST00000623027 5182 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS13CQ709C8 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS13CQ709C8 RNA5SP305-201ENST00000362665 119 ntBASIC4.63□□□□□ -1.67
VPS13CQ709C8 RPS27AP6-201ENST00000427962 448 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms