Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 MIR365B-201ENST00000362317 111 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 RN7SKP184-201ENST00000362348 333 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 RNA5SP485-201ENST00000365053 119 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 SNORA64.3-201ENST00000365647 134 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 MIR433-201ENST00000384837 93 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AL354707.3-201ENST00000427308 331 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 LINC00328-2P-201ENST00000436585 219 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 RAD1P2-201ENST00000446414 663 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC007386.1-201ENST00000455212 582 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 VPS25P1-201ENST00000455691 508 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC019084.1-201ENST00000457337 432 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC004890.1-201ENST00000461005 181 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 RPS7P10-201ENST00000464254 603 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC117394.1-201ENST00000477323 567 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 HMGB3P14-201ENST00000494195 599 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 GUSBP9-201ENST00000510138 584 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 RNU6-551P-201ENST00000516661 103 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 IGKV2-19-201ENST00000518132 283 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 OR4H6P-201ENST00000563771 921 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AC048341.3-201ENST00000619323 491 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AL162377.2-201ENST00000624532 337 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 AP001541.1-201ENST00000623322 1904 ntBASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NHLRC1Q6VVB1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 RNU1-49P-201ENST00000363468 159 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 RNU1-59P-201ENST00000364829 162 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 OR13C3-201ENST00000374781 1108 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AL139039.2-201ENST00000407436 479 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 RPS26P38-201ENST00000414476 348 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 ARAFP1-201ENST00000422172 605 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AJ239321.1-201ENST00000424255 564 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AKR1B10P1-201ENST00000425765 942 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC021876.1-201ENST00000425959 359 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC016908.1-201ENST00000442571 1219 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 SEPT7P6-201ENST00000469999 1143 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 RN7SL612P-201ENST00000497704 295 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC116917.1-201ENST00000520558 305 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 CYCSP25-201ENST00000525280 316 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AP001000.1-201ENST00000526843 742 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC009303.3-201ENST00000591103 736 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 AC073389.3-201ENST00000609434 935 ntBASIC5.57□□□□□ -1.52
NHLRC1Q6VVB1 U1.25-201ENST00000614085 162 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms