Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 USP9YP9-201ENST00000429406 715 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 KRTAP3-4P-201ENST00000430780 280 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC005297.1-201ENST00000444765 862 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 TPT1P13-201ENST00000449760 499 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AL356019.2-201ENST00000556738 3829 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC209154.1-201ENST00000582156 337 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC119403.2-201ENST00000590960 598 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 LINC02035-201ENST00000610128 5476 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 CTH-203ENST00000411986 2044 ntTSL 2 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 RPS27AP6-201ENST00000427962 448 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC126120.1-201ENST00000431082 470 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 SNRPCP2-201ENST00000504370 475 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 RBM22P12-201ENST00000567098 1255 ntBASIC5.83□□□□□ -1.48
RIF1Q5UIP0 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC020658.2-201ENST00000559030 4020 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC025809.2-201ENST00000625085 1802 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC114786.1-201ENST00000512892 1415 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 CYP4F29P-201ENST00000420685 446 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC006116.3-201ENST00000592968 361 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 MIR6758-201ENST00000620653 63 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AL450226.2-201ENST00000622913 439 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 Y_RNA.126-201ENST00000363382 111 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC026826.1-201ENST00000493002 361 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC092375.1-201ENST00000550410 637 ntBASIC5.82□□□□□ -1.48
RIF1Q5UIP0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.82□□□□□ -1.48
RIF1Q5UIP0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC005294.1-201ENST00000355509 281 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RNU1-46P-201ENST00000384425 164 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC012519.1-201ENST00000424588 610 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RBMY2QP-201ENST00000429799 1147 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RPL7L1P9-201ENST00000431298 745 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AL034399.1-201ENST00000451535 380 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 RPL23AP68-201ENST00000480924 445 ntBASIC5.81□□□□□ -1.48
RIF1Q5UIP0 AC063949.1-201ENST00000552900 865 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms