Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC9.58□□□□□ -0.88
SNAPC4Q5SXM2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SNAPC4Q5SXM2 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SNAPC4Q5SXM2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 CTAGE11P-201ENST00000451540 2353 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 RNA5SP30-201ENST00000365552 115 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC108075.1-201ENST00000424692 529 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 LDHBP2-201ENST00000456969 1005 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC007686.1-201ENST00000488511 463 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 FAM25E-202ENST00000608562 189 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 AC022726.2-201ENST00000634673 547 ntBASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
SNAPC4Q5SXM2 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AL590004.4-201ENST00000566733 7060 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC008937.3-201ENST00000606813 1700 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC005294.1-201ENST00000355509 281 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 RNA5SP339-201ENST00000390987 122 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 PTCD2P2-201ENST00000415579 1095 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC139365.2-201ENST00000517972 253 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AP001922.4-201ENST00000526967 290 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 AC091953.3-201ENST00000623220 236 ntBASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.56□□□□□ -0.88
SNAPC4Q5SXM2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 RNU1-24P-201ENST00000364285 165 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 AL390774.1-201ENST00000411924 246 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 SRSF1P1-201ENST00000424058 520 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 RPS29P22-201ENST00000472363 168 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 AC073610.1-201ENST00000489971 396 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 IGLV2-34-201ENST00000490007 283 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 MRPS21P7-201ENST00000566937 238 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 MIR4697-201ENST00000582977 78 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 AL157831.2-201ENST00000564681 3095 ntBASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SNAPC4Q5SXM2 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 COL6A4P1-202ENST00000487147 4317 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 RNA5SP350-201ENST00000363298 111 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 AL663074.2-201ENST00000440621 479 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 AC087672.1-201ENST00000479876 766 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 AC099521.1-201ENST00000482557 334 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 MGST2-204ENST00000506797 634 ntTSL 2 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC9.54□□□□□ -0.88
SNAPC4Q5SXM2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms