Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RN7SL836P-201ENST00000476140 296 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 RPS27P20-201ENST00000492051 246 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 RN7SL362P-201ENST00000494228 267 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.93□□□□□ -1.46
CDKL1Q00532 AC136777.2-201ENST00000522979 358 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.93□□□□□ -1.46
CDKL1Q00532 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.93□□□□□ -1.46
CDKL1Q00532 AC130365.2-201ENST00000525882 1201 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 AC244502.2-201ENST00000543361 851 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.93□□□□□ -1.46
CDKL1Q00532 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.93□□□□□ -1.46
CDKL1Q00532 ARGFXP2-201ENST00000579304 949 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.93□□□□□ -1.46
CDKL1Q00532 AL135999.3-201ENST00000610501 812 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 AC096861.1-201ENST00000616652 240 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.93□□□□□ -1.46
CDKL1Q00532 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.93□□□□□ -1.46
CDKL1Q00532 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 AC018717.1-201ENST00000457712 1505 ntBASIC5.93□□□□□ -1.46
CDKL1Q00532 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
CDKL1Q00532 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.93□□□□□ -1.46
CDKL1Q00532 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDKL1Q00532 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDKL1Q00532 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 RN7SKP17-201ENST00000411242 351 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 MYL6P5-201ENST00000412707 459 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 RPL35AP31-201ENST00000418340 337 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 FAM183DP-201ENST00000421987 399 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 RPL12P12-201ENST00000424633 501 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 TRIM60P16-201ENST00000444048 694 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 REG1CP-206ENST00000447469 496 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 RN7SL568P-201ENST00000493069 298 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 CCDC11P1-201ENST00000503137 1162 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.92□□□□□ -1.46
CDKL1Q00532 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.92□□□□□ -1.46
CDKL1Q00532 NPIPB14P-203ENST00000532298 987 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.92□□□□□ -1.46
CDKL1Q00532 AL078601.3-201ENST00000573303 535 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CDKL1Q00532 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDKL1Q00532 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.92□□□□□ -1.46
CDKL1Q00532 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 SAMM50P1-201ENST00000455403 1399 ntBASIC5.92□□□□□ -1.46
CDKL1Q00532 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.92□□□□□ -1.46
CDKL1Q00532 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDKL1Q00532 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.92□□□□□ -1.46
CDKL1Q00532 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.91□□□□□ -1.46
CDKL1Q00532 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.91□□□□□ -1.46
CDKL1Q00532 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.91□□□□□ -1.46
CDKL1Q00532 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.91□□□□□ -1.46
CDKL1Q00532 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.91□□□□□ -1.46
CDKL1Q00532 THAP12P9-201ENST00000503971 2360 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CDKL1Q00532 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDKL1Q00532 RNA5SP375-201ENST00000362975 119 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CDKL1Q00532 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CDKL1Q00532 AL096829.1-201ENST00000413677 457 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 AL035422.1-201ENST00000414193 397 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.91□□□□□ -1.46
CDKL1Q00532 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.91□□□□□ -1.46
CDKL1Q00532 AC092865.3-201ENST00000425390 1026 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 PSMD10P2-201ENST00000432890 672 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 SEPT14P12-201ENST00000442280 560 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.91□□□□□ -1.46
CDKL1Q00532 CUBNP2-201ENST00000443534 1139 ntBASIC5.91□□□□□ -1.46
CDKL1Q00532 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDKL1Q00532 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms