Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CCL20P78556 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.58□□□□□ -1.68
CCL20P78556 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCL20P78556 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.57□□□□□ -1.68
CCL20P78556 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 AL096829.1-201ENST00000413677 457 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.57□□□□□ -1.68
CCL20P78556 HSPE1P27-201ENST00000430808 296 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 AL133351.3-201ENST00000454998 193 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.57□□□□□ -1.68
CCL20P78556 RPL12P24-201ENST00000474907 486 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC025271.1-201ENST00000485045 429 ntBASIC4.57□□□□□ -1.68
CCL20P78556 RN7SL776P-201ENST00000493390 268 ntBASIC4.57□□□□□ -1.68
CCL20P78556 RPL10P7-201ENST00000495649 625 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC023424.1-201ENST00000496058 459 ntBASIC4.57□□□□□ -1.68
CCL20P78556 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 AC137549.1-201ENST00000514243 533 ntBASIC4.57□□□□□ -1.68
CCL20P78556 TMEM97P2-201ENST00000517841 403 ntBASIC4.57□□□□□ -1.68
CCL20P78556 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 OR4A17P-201ENST00000526032 904 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC137627.1-201ENST00000545761 289 ntBASIC4.57□□□□□ -1.68
CCL20P78556 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC4.57□□□□□ -1.68
CCL20P78556 OOSP1P2-201ENST00000579644 351 ntBASIC4.57□□□□□ -1.68
CCL20P78556 SYPL1P2-201ENST00000582878 727 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.57□□□□□ -1.68
CCL20P78556 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.57□□□□□ -1.68
CCL20P78556 AC024451.4-201ENST00000602578 752 ntBASIC4.57□□□□□ -1.68
CCL20P78556 AC006363.1-201ENST00000603806 463 ntBASIC4.57□□□□□ -1.68
CCL20P78556 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCL20P78556 AL035661.1-201ENST00000620459 1144 ntBASIC4.57□□□□□ -1.68
CCL20P78556 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 GVINP1-202ENST00000531871 7271 ntBASIC4.57□□□□□ -1.68
CCL20P78556 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.57□□□□□ -1.68
CCL20P78556 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCL20P78556 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.57□□□□□ -1.68
CCL20P78556 MFSD8-219ENST00000641228 2559 ntBASIC4.57□□□□□ -1.68
CCL20P78556 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 AP004607.3-201ENST00000530354 3915 ntBASIC4.56□□□□□ -1.68
CCL20P78556 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCL20P78556 RN7SKP221-201ENST00000410420 301 ntBASIC4.56□□□□□ -1.68
CCL20P78556 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 RPL12P18-201ENST00000437175 325 ntBASIC4.56□□□□□ -1.68
CCL20P78556 SOCS5P1-201ENST00000440415 949 ntBASIC4.56□□□□□ -1.68
CCL20P78556 COL11A2P1-205ENST00000441798 676 ntBASIC4.56□□□□□ -1.68
CCL20P78556 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 TCEA1P3-201ENST00000443005 880 ntBASIC4.56□□□□□ -1.68
CCL20P78556 AC092421.1-201ENST00000448148 418 ntBASIC4.56□□□□□ -1.68
CCL20P78556 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 OR4D12P-201ENST00000509361 911 ntBASIC4.56□□□□□ -1.68
CCL20P78556 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCL20P78556 AC011193.2-201ENST00000582638 367 ntBASIC4.56□□□□□ -1.68
CCL20P78556 AC005495.1-201ENST00000586611 1211 ntBASIC4.56□□□□□ -1.68
CCL20P78556 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC4.56□□□□□ -1.68
CCL20P78556 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.56□□□□□ -1.68
CCL20P78556 PRR13P3-201ENST00000603578 376 ntBASIC4.56□□□□□ -1.68
CCL20P78556 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.56□□□□□ -1.68
CCL20P78556 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 AL034549.2-201ENST00000618285 3373 ntBASIC4.56□□□□□ -1.68
CCL20P78556 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CCL20P78556 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms