Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RN7SL753P-201ENST00000581238 290 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.38□□□□□ -1.23
RHBDL3P58872 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC026367.3-201ENST00000619032 590 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AC026124.2-201ENST00000621847 656 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.38□□□□□ -1.23
RHBDL3P58872 AC119674.1-220ENST00000641502 1048 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 AC008691.1-209ENST00000642094 814 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.38□□□□□ -1.23
RHBDL3P58872 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RHBDL3P58872 SPATA31C1-201ENST00000420021 3895 ntBASIC7.38□□□□□ -1.23
RHBDL3P58872 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 RNA5SP156-201ENST00000410250 110 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AL354890.1-201ENST00000413730 346 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 UBE2V1P14-201ENST00000415815 558 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC013470.3-201ENST00000420252 1194 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC017019.1-201ENST00000426129 261 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC104843.2-201ENST00000427666 297 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 RN7SL221P-201ENST00000466190 281 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 RN7SL193P-201ENST00000491708 276 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RHBDL3P58872 RN7SKP98-201ENST00000517070 156 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.37□□□□□ -1.23
RHBDL3P58872 MIR3189-201ENST00000578735 73 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC020765.1-201ENST00000604296 328 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 OR8G7P-201ENST00000616658 848 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 MIR6729-201ENST00000618194 65 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC245014.3-201ENST00000618589 347 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AC129778.1-202ENST00000623812 261 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AL591379.1-207ENST00000635982 261 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC022905.1-201ENST00000503430 3048 ntBASIC7.37□□□□□ -1.23
RHBDL3P58872 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.37□□□□□ -1.23
RHBDL3P58872 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.37□□□□□ -1.23
RHBDL3P58872 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RHBDL3P58872 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RHBDL3P58872 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.36□□□□□ -1.23
RHBDL3P58872 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 OR51C1P-202ENST00000641159 1444 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 TMSB4XP2-201ENST00000335179 210 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 RN7SKP78-201ENST00000364711 318 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AL589655.1-201ENST00000405398 482 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.36□□□□□ -1.23
RHBDL3P58872 PTP4A1P1-201ENST00000420539 515 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 KIF4CP-201ENST00000422742 1279 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 AL445528.1-201ENST00000426330 420 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 AL512593.1-201ENST00000444758 779 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC005077.1-201ENST00000449226 375 ntBASIC7.36□□□□□ -1.23
RHBDL3P58872 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RHBDL3P58872 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms