Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 VN1R81P-201ENST00000602085 372 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AP001267.4-201ENST00000602598 545 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 RPSAP75-201ENST00000605848 301 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AL008723.3-201ENST00000608926 449 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AL135999.3-201ENST00000610501 812 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 MIR6721-201ENST00000617181 87 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN20P56880 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 OR7E91P-202ENST00000642062 1198 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 AL136984.1-201ENST00000607611 1893 ntBASIC5.72□□□□□ -1.49
CLDN20P56880 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
CLDN20P56880 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN20P56880 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN20P56880 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN20P56880 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN20P56880 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN20P56880 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CLDN20P56880 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CLDN20P56880 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN20P56880 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN20P56880 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 AC107977.1-201ENST00000355745 939 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 MIR188-201ENST00000385034 86 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 YWHAZP6-201ENST00000399764 738 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AL139039.2-201ENST00000407436 479 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 MIR1275-201ENST00000408770 80 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 U3.43-201ENST00000410734 213 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AC099782.1-201ENST00000425889 474 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AC112492.2-201ENST00000432774 1030 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 RN7SL643P-201ENST00000471845 291 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AL355032.1-201ENST00000472981 438 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 ATG10-AS1-201ENST00000504846 648 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 ZNF519P4-201ENST00000514008 125 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 RNA5SP473-201ENST00000516402 125 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 IGHV4-55-201ENST00000520889 368 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 AC024405.1-201ENST00000532521 1042 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN20P56880 AC009729.1-201ENST00000548873 1133 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.71□□□□□ -1.5
CLDN20P56880 AL078601.3-201ENST00000573303 535 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN20P56880 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 uc_338.31-201ENST00000615595 186 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 MIR6806-201ENST00000622141 64 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AL683826.1-201ENST00000624104 627 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AL356094.1-201ENST00000624663 1212 ntBASIC5.71□□□□□ -1.5
CLDN20P56880 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CLDN20P56880 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN20P56880 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.71□□□□□ -1.5
CLDN20P56880 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CLDN20P56880 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.7□□□□□ -1.5
CLDN20P56880 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 KIF4CP-201ENST00000422742 1279 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AC092651.1-201ENST00000426110 312 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.7□□□□□ -1.5
CLDN20P56880 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLDN20P56880 AC094019.1-201ENST00000434678 472 ntBASIC5.7□□□□□ -1.5
CLDN20P56880 AL390879.1-201ENST00000439143 386 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms