Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGCS2P54868 SNORA43.3-201ENST00000517240 103 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGCS2P54868 MIR1273E-201ENST00000581165 102 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGCS2P54868 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGCS2P54868 AL035661.1-201ENST00000620459 1144 ntBASIC6.9□□□□□ -1.3
HMGCS2P54868 AC013268.3-201ENST00000262716 2324 ntBASIC6.9□□□□□ -1.31
HMGCS2P54868 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGCS2P54868 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.9□□□□□ -1.31
HMGCS2P54868 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGCS2P54868 AC022819.1-201ENST00000563495 3910 ntBASIC6.9□□□□□ -1.31
HMGCS2P54868 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.9□□□□□ -1.31
HMGCS2P54868 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGCS2P54868 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HMGCS2P54868 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 RN7SKP162-201ENST00000363605 345 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 RPS4XP5-201ENST00000419038 768 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.89□□□□□ -1.31
HMGCS2P54868 CLUHP1-201ENST00000435012 1190 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 Z84478.1-201ENST00000438230 1219 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 AL022237.1-201ENST00000446663 358 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 AC103563.5-201ENST00000455643 364 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 RN7SL515P-201ENST00000463999 297 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGCS2P54868 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 AC069234.4-201ENST00000621276 412 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 OR11H2-202ENST00000641517 1085 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC063923.1-201ENST00000478982 1619 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
HMGCS2P54868 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AC123769.1-201ENST00000530992 3192 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HMGCS2P54868 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGCS2P54868 AL117339.4-201ENST00000608335 7063 ntBASIC6.89□□□□□ -1.31
HMGCS2P54868 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGCS2P54868 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGCS2P54868 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC027279.1-201ENST00000568885 4284 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGCS2P54868 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 AL163193.1-201ENST00000444895 788 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.88□□□□□ -1.31
HMGCS2P54868 SIAH1P1-201ENST00000479411 923 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC008429.4-201ENST00000521201 182 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.88□□□□□ -1.31
HMGCS2P54868 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.88□□□□□ -1.31
HMGCS2P54868 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.88□□□□□ -1.31
HMGCS2P54868 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.88□□□□□ -1.31
HMGCS2P54868 SUMO2P15-201ENST00000604285 278 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 AL021707.7-201ENST00000607991 416 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 AC022919.1-201ENST00000624979 626 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.88□□□□□ -1.31
HMGCS2P54868 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 AC092821.3-202ENST00000641304 2767 ntBASIC6.88□□□□□ -1.31
HMGCS2P54868 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGCS2P54868 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.88□□□□□ -1.31
HMGCS2P54868 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms