Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC099670.1-201ENST00000455141 783 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC079193.1-201ENST00000460497 588 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.79□□□□□ -1.48
GTF2A1P52655 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.79□□□□□ -1.48
GTF2A1P52655 RN7SL654P-201ENST00000479178 292 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 RPL7AP23-201ENST00000482625 776 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.79□□□□□ -1.48
GTF2A1P52655 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.79□□□□□ -1.48
GTF2A1P52655 AP006245.2-201ENST00000522004 300 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.79□□□□□ -1.48
GTF2A1P52655 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.79□□□□□ -1.48
GTF2A1P52655 BMS1P16-201ENST00000556075 1147 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC090826.1-203ENST00000569235 490 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.79□□□□□ -1.48
GTF2A1P52655 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.79□□□□□ -1.48
GTF2A1P52655 FRG2MP-201ENST00000613317 856 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC116165.3-201ENST00000614524 400 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GTF2A1P52655 BX005040.2-201ENST00000620504 370 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC106782.7-201ENST00000624024 418 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC018692.2-201ENST00000624130 348 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC133555.5-201ENST00000624430 418 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 AC017037.4-201ENST00000624526 826 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
GTF2A1P52655 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 AP001541.1-201ENST00000623322 1904 ntBASIC5.79□□□□□ -1.48
GTF2A1P52655 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.79□□□□□ -1.48
GTF2A1P52655 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GTF2A1P52655 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.79□□□□□ -1.48
GTF2A1P52655 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
GTF2A1P52655 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GTF2A1P52655 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF2A1P52655 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF2A1P52655 KARSP1-201ENST00000451871 1752 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF2A1P52655 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AL078599.1-201ENST00000402075 293 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF2A1P52655 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF2A1P52655 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF2A1P52655 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 RN7SL223P-201ENST00000470401 294 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 RPS26P6-201ENST00000475156 348 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 AL928654.1-201ENST00000476081 354 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 RPL5P3-201ENST00000493817 889 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.78□□□□□ -1.48
GTF2A1P52655 NDUFA3P2-201ENST00000531434 232 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 MIR1273F-201ENST00000580581 99 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 MIR4428-201ENST00000584884 73 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.78□□□□□ -1.48
GTF2A1P52655 COX6CP16-201ENST00000603667 216 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.78□□□□□ -1.48
GTF2A1P52655 AL161931.1-201ENST00000612768 246 ntBASIC5.78□□□□□ -1.48
GTF2A1P52655 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GTF2A1P52655 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GTF2A1P52655 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.77□□□□□ -1.48
GTF2A1P52655 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.77□□□□□ -1.49
GTF2A1P52655 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.77□□□□□ -1.49
GTF2A1P52655 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GTF2A1P52655 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AL359694.1-201ENST00000403247 604 ntBASIC5.77□□□□□ -1.49
GTF2A1P52655 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.77□□□□□ -1.49
GTF2A1P52655 OR52E3P-201ENST00000452083 936 ntBASIC5.77□□□□□ -1.49
GTF2A1P52655 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.77□□□□□ -1.49
GTF2A1P52655 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.77□□□□□ -1.49
GTF2A1P52655 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GTF2A1P52655 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.77□□□□□ -1.49
GTF2A1P52655 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
GTF2A1P52655 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms