Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RN7SKP77-201ENST00000363261 353 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 RN7SKP162-201ENST00000363605 345 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HCFC1P51610 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 AL391422.1-201ENST00000402155 436 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 RPS21P8-201ENST00000413365 247 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.3□□□□□ -1.56
HCFC1P51610 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 RPS27AP2-201ENST00000457576 465 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC092865.1-201ENST00000544395 1023 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC104695.2-201ENST00000605056 775 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HCFC1P51610 ZNF969P-201ENST00000510345 2341 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 AC006213.6-201ENST00000623722 4179 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HCFC1P51610 MIR433-201ENST00000384837 93 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AP003170.5-201ENST00000397185 335 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 SNORA70.20-201ENST00000516848 126 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 CYCSP22-201ENST00000517555 339 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AL121579.2-201ENST00000555466 590 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC091078.2-201ENST00000557145 559 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
HCFC1P51610 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 FAM27E4-201ENST00000605259 342 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AC006924.1-201ENST00000610750 559 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.3□□□□□ -1.56
HCFC1P51610 AC012254.5-201ENST00000623573 478 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 OR7A1P-202ENST00000641542 1158 ntBASIC5.3□□□□□ -1.56
HCFC1P51610 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 AC027088.4-201ENST00000611559 1947 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.29□□□□□ -1.56
HCFC1P51610 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.29□□□□□ -1.56
HCFC1P51610 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HCFC1P51610 AL050335.1-201ENST00000396909 869 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 AC097721.1-201ENST00000427150 1253 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 AL512637.1-201ENST00000439523 1231 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 AC073594.1-201ENST00000462065 364 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 AC006539.1-201ENST00000481419 501 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 FTH1P8-201ENST00000498161 514 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC015802.2-201ENST00000589690 189 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HCFC1P51610 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC009950.2-201ENST00000636548 183 ntBASIC5.29□□□□□ -1.56
HCFC1P51610 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.29□□□□□ -1.56
HCFC1P51610 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.29□□□□□ -1.56
HCFC1P51610 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HCFC1P51610 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HCFC1P51610 AC011416.1-201ENST00000514947 1732 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms