Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
BRCC3P46736 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCC3P46736 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BRCC3P46736 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
BRCC3P46736 SELENOWP1-201ENST00000322792 252 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 RN7SKP292-201ENST00000365522 317 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 RN7SKP81-201ENST00000365603 331 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 SNORA17A-201ENST00000391185 133 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 RPS21P8-201ENST00000413365 247 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 NMD3P2-201ENST00000421815 761 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 KIF4CP-201ENST00000422742 1279 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.42□□□□□ -1.38
BRCC3P46736 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.42□□□□□ -1.38
BRCC3P46736 AL512637.1-201ENST00000439523 1231 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.42□□□□□ -1.38
BRCC3P46736 AL022319.1-201ENST00000458183 1167 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 AC115223.1-201ENST00000466377 870 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 AC023245.1-201ENST00000468501 517 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 RPL5P12-201ENST00000477071 851 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 AC083795.1-201ENST00000491760 320 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 RN7SL101P-201ENST00000496350 279 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
BRCC3P46736 AC027544.3-201ENST00000535082 757 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 AC006530.1-201ENST00000555980 571 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 ZNF322P1-201ENST00000568013 1209 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 AL136131.3-201ENST00000607600 188 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.42□□□□□ -1.38
BRCC3P46736 AC127024.6-201ENST00000621598 424 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 SNORA17.5-201ENST00000630429 132 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 CCNT2P1-201ENST00000423082 1315 ntBASIC6.42□□□□□ -1.38
BRCC3P46736 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
BRCC3P46736 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.42□□□□□ -1.38
BRCC3P46736 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.41□□□□□ -1.38
BRCC3P46736 OLMALINC-203ENST00000641087 3779 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 FUNDC2P3-201ENST00000334716 533 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 AL512422.1-201ENST00000407033 553 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 TUBB4BP6-201ENST00000437576 479 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.41□□□□□ -1.38
BRCC3P46736 RPL36AP39-201ENST00000445859 318 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.41□□□□□ -1.38
BRCC3P46736 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 AL122020.1-201ENST00000472287 459 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 AC008629.2-201ENST00000503783 483 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.41□□□□□ -1.38
BRCC3P46736 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.41□□□□□ -1.38
BRCC3P46736 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.41□□□□□ -1.38
BRCC3P46736 AC135626.1-201ENST00000556983 435 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.41□□□□□ -1.38
BRCC3P46736 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.41□□□□□ -1.38
BRCC3P46736 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.41□□□□□ -1.38
BRCC3P46736 OR8G3P-202ENST00000641572 1255 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.41□□□□□ -1.38
BRCC3P46736 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
BRCC3P46736 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 AP000547.3-204ENST00000588548 2523 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
BRCC3P46736 NEPNP-201ENST00000404786 1371 ntBASIC6.41□□□□□ -1.38
BRCC3P46736 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
BRCC3P46736 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.41□□□□□ -1.38
BRCC3P46736 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
BRCC3P46736 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC015689.2-201ENST00000528172 1738 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
BRCC3P46736 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
BRCC3P46736 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
BRCC3P46736 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
BRCC3P46736 RN7SKP128-201ENST00000364270 303 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 RNA5SP500-201ENST00000364486 119 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.4□□□□□ -1.38
BRCC3P46736 AC087752.1-201ENST00000391360 558 ntBASIC6.4□□□□□ -1.38
BRCC3P46736 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms