Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 AC003992.1-201ENST00000635364 557 ntBASIC6.56□□□□□ -1.36
SSR1P43307 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.56□□□□□ -1.36
SSR1P43307 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSR1P43307 SOCS5P3-201ENST00000425115 1576 ntBASIC6.56□□□□□ -1.36
SSR1P43307 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SSR1P43307 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SSR1P43307 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 CCNT2P1-201ENST00000423082 1315 ntBASIC6.55□□□□□ -1.36
SSR1P43307 AC083843.2-201ENST00000568248 6253 ntBASIC6.55□□□□□ -1.36
SSR1P43307 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SSR1P43307 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.55□□□□□ -1.36
SSR1P43307 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 RNU1-146P-201ENST00000364015 165 ntBASIC6.55□□□□□ -1.36
SSR1P43307 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 EMC3-AS1-205ENST00000438698 534 ntBASIC6.55□□□□□ -1.36
SSR1P43307 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.55□□□□□ -1.36
SSR1P43307 AC016908.1-201ENST00000442571 1219 ntBASIC6.55□□□□□ -1.36
SSR1P43307 RPS27AP3-201ENST00000453803 454 ntBASIC6.55□□□□□ -1.36
SSR1P43307 Z83838.1-202ENST00000456225 839 ntBASIC6.55□□□□□ -1.36
SSR1P43307 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.55□□□□□ -1.36
SSR1P43307 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.55□□□□□ -1.36
SSR1P43307 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.55□□□□□ -1.36
SSR1P43307 AC135983.3-201ENST00000528049 1226 ntBASIC6.55□□□□□ -1.36
SSR1P43307 OR4A40P-201ENST00000533878 948 ntBASIC6.55□□□□□ -1.36
SSR1P43307 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.55□□□□□ -1.36
SSR1P43307 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.55□□□□□ -1.36
SSR1P43307 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 PCAT14-202ENST00000627127 3935 ntBASIC6.55□□□□□ -1.36
SSR1P43307 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.55□□□□□ -1.36
SSR1P43307 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SSR1P43307 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 TTC39DP-201ENST00000416781 1688 ntBASIC6.55□□□□□ -1.36
SSR1P43307 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SSR1P43307 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SSR1P43307 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 AC217777.1-201ENST00000570034 1471 ntBASIC6.54□□□□□ -1.36
SSR1P43307 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SSR1P43307 RPL11P4-201ENST00000332269 436 ntBASIC6.54□□□□□ -1.36
SSR1P43307 OSTCP4-201ENST00000424397 449 ntBASIC6.54□□□□□ -1.36
SSR1P43307 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.54□□□□□ -1.36
SSR1P43307 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.54□□□□□ -1.36
SSR1P43307 AC112187.1-201ENST00000455837 479 ntBASIC6.54□□□□□ -1.36
SSR1P43307 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 RARRES2P3-201ENST00000457739 473 ntBASIC6.54□□□□□ -1.36
SSR1P43307 RPS4XP12-201ENST00000461747 709 ntBASIC6.54□□□□□ -1.36
SSR1P43307 RN7SL643P-201ENST00000471845 291 ntBASIC6.54□□□□□ -1.36
SSR1P43307 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 AC113191.1-201ENST00000517759 403 ntBASIC6.54□□□□□ -1.36
SSR1P43307 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SSR1P43307 IGHV4-55-201ENST00000520889 368 ntBASIC6.54□□□□□ -1.36
SSR1P43307 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.54□□□□□ -1.36
SSR1P43307 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 RPL41P2-201ENST00000544920 409 ntBASIC6.54□□□□□ -1.36
SSR1P43307 AC008055.1-201ENST00000547032 609 ntBASIC6.54□□□□□ -1.36
SSR1P43307 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.54□□□□□ -1.36
SSR1P43307 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.54□□□□□ -1.36
SSR1P43307 NPIPB1P-202ENST00000588786 828 ntBASIC6.54□□□□□ -1.36
SSR1P43307 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.54□□□□□ -1.36
SSR1P43307 AC093388.1-201ENST00000609166 430 ntBASIC6.54□□□□□ -1.36
SSR1P43307 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.54□□□□□ -1.36
SSR1P43307 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.54□□□□□ -1.36
SSR1P43307 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SSR1P43307 HDAC1P2-201ENST00000453661 1398 ntBASIC6.54□□□□□ -1.36
SSR1P43307 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.53□□□□□ -1.36
SSR1P43307 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSR1P43307 AL121768.1-201ENST00000613917 2544 ntBASIC6.53□□□□□ -1.36
SSR1P43307 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSR1P43307 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSR1P43307 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
SSR1P43307 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSR1P43307 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.53□□□□□ -1.36
SSR1P43307 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SSR1P43307 RNU2-18P-201ENST00000411224 162 ntBASIC6.53□□□□□ -1.36
SSR1P43307 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.53□□□□□ -1.36
SSR1P43307 AL360013.1-201ENST00000419031 858 ntBASIC6.53□□□□□ -1.36
SSR1P43307 AC002127.1-201ENST00000421305 225 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms