Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 AC093671.1-201ENST00000624981 2929 ntBASIC5.65□□□□□ -1.5
RFC3P40938 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 PSG10P-201ENST00000501199 1500 ntBASIC5.65□□□□□ -1.5
RFC3P40938 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 AC091305.2-201ENST00000624049 1576 ntBASIC5.65□□□□□ -1.5
RFC3P40938 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFC3P40938 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 AL445238.1-204ENST00000400311 463 ntBASIC5.65□□□□□ -1.5
RFC3P40938 RNA5SP156-201ENST00000410250 110 ntBASIC5.65□□□□□ -1.5
RFC3P40938 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 RPS29P14-201ENST00000431518 171 ntBASIC5.65□□□□□ -1.5
RFC3P40938 OR3D1P-201ENST00000438288 955 ntBASIC5.65□□□□□ -1.5
RFC3P40938 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 AC002553.3-201ENST00000453002 341 ntBASIC5.65□□□□□ -1.5
RFC3P40938 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 OR5H7P-201ENST00000514084 930 ntBASIC5.65□□□□□ -1.5
RFC3P40938 CR383658.1-201ENST00000514609 734 ntBASIC5.65□□□□□ -1.5
RFC3P40938 TRIM77BP-201ENST00000524985 1119 ntBASIC5.65□□□□□ -1.5
RFC3P40938 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.65□□□□□ -1.5
RFC3P40938 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.65□□□□□ -1.5
RFC3P40938 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 AC068768.2-201ENST00000602352 343 ntBASIC5.65□□□□□ -1.5
RFC3P40938 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.65□□□□□ -1.5
RFC3P40938 AL096712.1-201ENST00000614561 159 ntBASIC5.65□□□□□ -1.5
RFC3P40938 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC3P40938 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFC3P40938 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC3P40938 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC3P40938 AC005725.1-201ENST00000577346 2607 ntBASIC5.65□□□□□ -1.51
RFC3P40938 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFC3P40938 AC074141.1-201ENST00000588129 2995 ntBASIC5.65□□□□□ -1.51
RFC3P40938 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RFC3P40938 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.65□□□□□ -1.51
RFC3P40938 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RFC3P40938 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RFC3P40938 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RFC3P40938 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.65□□□□□ -1.51
RFC3P40938 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
RFC3P40938 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.65□□□□□ -1.51
RFC3P40938 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFC3P40938 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC3P40938 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 AP002370.1-201ENST00000528055 1602 ntBASIC5.64□□□□□ -1.51
RFC3P40938 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC3P40938 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 SNORA21-201ENST00000362423 132 ntBASIC5.64□□□□□ -1.51
RFC3P40938 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 UBE2V1P14-201ENST00000415815 558 ntBASIC5.64□□□□□ -1.51
RFC3P40938 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 AC130360.1-201ENST00000425489 1117 ntBASIC5.64□□□□□ -1.51
RFC3P40938 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 MGAT2P1-201ENST00000449718 797 ntBASIC5.64□□□□□ -1.51
RFC3P40938 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC3P40938 AC025458.1-201ENST00000506046 166 ntBASIC5.64□□□□□ -1.51
RFC3P40938 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 OR5D2P-201ENST00000524390 911 ntBASIC5.64□□□□□ -1.51
RFC3P40938 AC130365.2-201ENST00000525882 1201 ntBASIC5.64□□□□□ -1.51
RFC3P40938 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC3P40938 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC3P40938 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC3P40938 AC024587.1-201ENST00000505925 2157 ntBASIC5.64□□□□□ -1.51
RFC3P40938 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 AC105235.1-201ENST00000623208 1816 ntBASIC5.64□□□□□ -1.51
RFC3P40938 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFC3P40938 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFC3P40938 AL449283.1-201ENST00000602631 3403 ntBASIC5.64□□□□□ -1.51
RFC3P40938 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
RFC3P40938 AC092070.2-203ENST00000598377 3644 ntBASIC5.63□□□□□ -1.51
RFC3P40938 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms