Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.4□□□□□ -1.22
TM4SF1P30408 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC7.4□□□□□ -1.22
TM4SF1P30408 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.4□□□□□ -1.22
TM4SF1P30408 AC003992.1-201ENST00000635364 557 ntBASIC7.4□□□□□ -1.22
TM4SF1P30408 AC092725.2-201ENST00000567658 1389 ntBASIC7.4□□□□□ -1.22
TM4SF1P30408 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TM4SF1P30408 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TM4SF1P30408 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.4□□□□□ -1.23
TM4SF1P30408 AP001157.1-201ENST00000550837 2339 ntBASIC7.4□□□□□ -1.23
TM4SF1P30408 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
TM4SF1P30408 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.4□□□□□ -1.23
TM4SF1P30408 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TM4SF1P30408 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TM4SF1P30408 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
TM4SF1P30408 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
TM4SF1P30408 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TM4SF1P30408 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TM4SF1P30408 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 FAM32BP-201ENST00000344033 333 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AL355994.1-201ENST00000424379 260 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 RPS12P17-201ENST00000438591 377 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.39□□□□□ -1.23
TM4SF1P30408 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 RANP1-206ENST00000455094 651 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.39□□□□□ -1.23
TM4SF1P30408 AC009120.1-201ENST00000493458 473 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 SCARNA6.1-201ENST00000516989 238 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.39□□□□□ -1.23
TM4SF1P30408 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.39□□□□□ -1.23
TM4SF1P30408 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.39□□□□□ -1.23
TM4SF1P30408 AC015720.2-201ENST00000567709 334 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 OR7A8P-201ENST00000595427 913 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC010245.2-201ENST00000606908 1167 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AL021368.3-201ENST00000607119 578 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AL139099.4-201ENST00000614802 114 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 OR11H2-202ENST00000641517 1085 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TM4SF1P30408 UG0898H09-202ENST00000623646 7040 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TM4SF1P30408 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.39□□□□□ -1.23
TM4SF1P30408 MRE11P1-201ENST00000464884 2127 ntBASIC7.39□□□□□ -1.23
TM4SF1P30408 NCOA4P3-201ENST00000513203 1877 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
TM4SF1P30408 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.38□□□□□ -1.23
TM4SF1P30408 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.38□□□□□ -1.23
TM4SF1P30408 RNA5SP514-201ENST00000363717 111 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.38□□□□□ -1.23
TM4SF1P30408 MIR585-201ENST00000384887 94 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 RN7SKP216-201ENST00000411050 312 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.38□□□□□ -1.23
TM4SF1P30408 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.38□□□□□ -1.23
TM4SF1P30408 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.38□□□□□ -1.23
TM4SF1P30408 OR2AO1P-201ENST00000476497 403 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 NRBF2P4-201ENST00000520874 850 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.38□□□□□ -1.23
TM4SF1P30408 SETP3-201ENST00000581726 813 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.38□□□□□ -1.23
TM4SF1P30408 AL512329.2-201ENST00000607350 548 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.38□□□□□ -1.23
TM4SF1P30408 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TM4SF1P30408 AC006213.6-201ENST00000623722 4179 ntBASIC7.38□□□□□ -1.23
TM4SF1P30408 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.38□□□□□ -1.23
TM4SF1P30408 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.37□□□□□ -1.23
TM4SF1P30408 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.37□□□□□ -1.23
TM4SF1P30408 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 RNA5SP183-201ENST00000362452 119 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TM4SF1P30408 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.37□□□□□ -1.23
TM4SF1P30408 AC009804.1-201ENST00000400949 179 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.37□□□□□ -1.23
TM4SF1P30408 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 AL139148.1-201ENST00000427122 680 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TM4SF1P30408 AL022237.1-201ENST00000446663 358 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 OR7E116P-201ENST00000448529 957 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.37□□□□□ -1.23
TM4SF1P30408 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.37□□□□□ -1.23
TM4SF1P30408 SUMO2P7-201ENST00000511179 285 ntBASIC7.37□□□□□ -1.23
TM4SF1P30408 AC253576.1-201ENST00000511645 1156 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms