Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A5P29400 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A5P29400 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A5P29400 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A5P29400 AC012616.1-201ENST00000600294 197 ntBASIC6.95□□□□□ -1.3
COL4A5P29400 AC087763.1-201ENST00000603391 286 ntBASIC6.95□□□□□ -1.3
COL4A5P29400 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A5P29400 AC132068.1-201ENST00000623805 459 ntBASIC6.95□□□□□ -1.3
COL4A5P29400 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A5P29400 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A5P29400 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL4A5P29400 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A5P29400 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A5P29400 LINC01616-201ENST00000561816 2280 ntBASIC6.95□□□□□ -1.3
COL4A5P29400 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A5P29400 RNA5SP335-201ENST00000363817 110 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.94□□□□□ -1.3
COL4A5P29400 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A5P29400 AC023141.8-201ENST00000442554 208 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 AL450996.1-201ENST00000445574 1202 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 RN7SL165P-201ENST00000477476 291 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 TPM3P3-201ENST00000521343 354 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.94□□□□□ -1.3
COL4A5P29400 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
COL4A5P29400 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 MIR4260-201ENST00000583107 67 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.94□□□□□ -1.3
COL4A5P29400 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 AC005618.1-201ENST00000606901 3148 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.94□□□□□ -1.3
COL4A5P29400 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
COL4A5P29400 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
COL4A5P29400 AC008957.3-201ENST00000624112 2242 ntBASIC6.94□□□□□ -1.3
COL4A5P29400 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
COL4A5P29400 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 FAM32BP-201ENST00000344033 333 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 RNA5SP319-201ENST00000362768 119 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 MIR130A-201ENST00000385274 89 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 GAPDHP42-201ENST00000406848 981 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 RPL37P18-201ENST00000411602 243 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 MYL6P5-201ENST00000412707 459 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AC108075.1-201ENST00000424692 529 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.93□□□□□ -1.3
COL4A5P29400 OR6D1P-201ENST00000436165 939 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 PA2G4P6-201ENST00000438325 1197 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AL022319.1-201ENST00000458183 1167 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 ACA64.4-201ENST00000459070 127 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AC099521.1-201ENST00000482557 334 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A5P29400 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 AC024589.2-201ENST00000605642 1294 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A5P29400 AL445528.2-201ENST00000620582 470 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A5P29400 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A5P29400 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.93□□□□□ -1.3
COL4A5P29400 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL4A5P29400 MIR133B-201ENST00000362210 119 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 AC015977.1-201ENST00000418887 292 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.93□□□□□ -1.3
COL4A5P29400 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.93□□□□□ -1.3
COL4A5P29400 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL4A5P29400 RPS23P9-201ENST00000448848 438 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 RPL23AP40-201ENST00000487630 390 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 AC147055.3-201ENST00000510547 851 ntBASIC6.93□□□□□ -1.3
COL4A5P29400 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms