Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AP002453.1-201ENST00000492327 668 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC112484.3-201ENST00000505910 329 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC108103.1-201ENST00000511286 446 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 RN7SKP248-201ENST00000516278 305 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC023310.2-201ENST00000553844 547 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ADAM3B-201ENST00000569937 840 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AL080312.2-201ENST00000613001 630 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC068769.1-201ENST00000474767 2426 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CUL4AP1-201ENST00000514750 1863 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 EIF3EP1-201ENST00000433978 1316 ntBASIC6.19□□□□□ -1.42
HLA-DPA1P20036 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DPA1P20036 AC024587.1-201ENST00000505925 2157 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC092724.1-201ENST00000624623 3397 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC107977.1-201ENST00000355745 939 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RN7SKP187-201ENST00000365536 330 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RN7SKP108-201ENST00000411367 328 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 PRUNEP1-201ENST00000425846 705 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 PSMD10P2-201ENST00000432890 672 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC118758.1-202ENST00000454719 225 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RN7SL168P-201ENST00000463821 279 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RN7SL352P-201ENST00000466002 277 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AL355032.1-201ENST00000472981 438 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AL035690.1-201ENST00000490892 383 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC122718.2-201ENST00000505325 591 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AP001960.1-201ENST00000506494 658 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC008429.4-201ENST00000521201 182 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC024405.1-201ENST00000532521 1042 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC007494.1-201ENST00000562293 760 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RNU4ATAC-201ENST00000580972 127 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 SMIM12P1-201ENST00000603004 274 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC004890.3-201ENST00000605566 1095 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 RN7SL261P-201ENST00000613441 282 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 MIR7109-201ENST00000613748 65 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AC018659.2-201ENST00000624690 715 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 CASC19-274ENST00000642018 970 ntBASIC6.18□□□□□ -1.42
HLA-DPA1P20036 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DPA1P20036 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 PROS2P-201ENST00000474651 1951 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC018717.1-201ENST00000457712 1505 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 OR56A4-201ENST00000330728 1209 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 RNA5SP279-201ENST00000365513 117 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 YWHAZP6-201ENST00000399764 738 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 MIR1275-201ENST00000408770 80 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL035422.1-201ENST00000414193 397 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms