Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGA1P17096 U3.25-201ENST00000391209 220 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 RPL34P3-201ENST00000421454 338 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 AL731534.1-201ENST00000434711 269 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 AL162739.1-201ENST00000450606 307 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 YWHAEP1-201ENST00000453697 763 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 RPSAP39-201ENST00000467439 883 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 AL137246.2-201ENST00000613439 662 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AC004477.3-201ENST00000614061 590 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AP001885.1-201ENST00000621658 558 ntBASIC6.15□□□□□ -1.42
HMGA1P17096 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGA1P17096 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGA1P17096 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGA1P17096 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGA1P17096 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGA1P17096 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HMGA1P17096 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGA1P17096 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGA1P17096 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HMGA1P17096 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.15□□□□□ -1.43
HMGA1P17096 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
HMGA1P17096 THAP12P9-201ENST00000503971 2360 ntBASIC6.15□□□□□ -1.43
HMGA1P17096 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMGA1P17096 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
HMGA1P17096 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.15□□□□□ -1.43
HMGA1P17096 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 AL355377.1-201ENST00000621125 1653 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 OLMALINC-203ENST00000641087 3779 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGA1P17096 AL662874.1-201ENST00000426065 230 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGA1P17096 AC002504.1-201ENST00000438281 691 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AL663074.2-201ENST00000440621 479 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGA1P17096 RPSAP37-201ENST00000470913 821 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AC099521.1-201ENST00000482557 334 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.14□□□□□ -1.43
HMGA1P17096 RN7SL284P-201ENST00000498823 275 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AC022404.1-201ENST00000555320 273 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.14□□□□□ -1.43
HMGA1P17096 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 MIR132-201ENST00000591554 101 ntBASIC6.14□□□□□ -1.43
HMGA1P17096 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGA1P17096 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
HMGA1P17096 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HMGA1P17096 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HMGA1P17096 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.14□□□□□ -1.43
HMGA1P17096 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.14□□□□□ -1.43
HMGA1P17096 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
HMGA1P17096 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.13□□□□□ -1.43
HMGA1P17096 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.13□□□□□ -1.43
HMGA1P17096 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 BMS1P17-202ENST00000416720 316 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AL513325.1-201ENST00000417716 1034 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 AC016027.5-201ENST00000427227 210 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AL121776.1-201ENST00000429337 372 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 HMGB3P24-201ENST00000433260 622 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 CUBNP2-201ENST00000443534 1139 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HMGA1P17096 LRRC37A14P-201ENST00000452297 462 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 RPL38P3-201ENST00000484463 213 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AL035690.1-201ENST00000490892 383 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AC138866.2-201ENST00000508650 584 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC074087.1-201ENST00000512059 724 ntBASIC6.13□□□□□ -1.43
HMGA1P17096 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.13□□□□□ -1.43
HMGA1P17096 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms