Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AL590763.1-201ENST00000398297 1545 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 LINC01963-201ENST00000562038 3148 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL11A1P12107 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC007568.1-201ENST00000422912 471 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.66□□□□□ -1.34
COL11A1P12107 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.66□□□□□ -1.34
COL11A1P12107 RN7SL547P-201ENST00000490793 290 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 RNA5SP34-201ENST00000516887 130 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 FO393422.1-201ENST00000603908 708 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC005840.5-201ENST00000619166 599 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 CASC19-222ENST00000641321 1173 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL11A1P12107 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 IMMTP1-201ENST00000435590 2219 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.65□□□□□ -1.34
COL11A1P12107 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
COL11A1P12107 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
COL11A1P12107 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
COL11A1P12107 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 AL159987.1-201ENST00000347911 293 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.65□□□□□ -1.34
COL11A1P12107 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.65□□□□□ -1.34
COL11A1P12107 AC096775.1-201ENST00000437724 448 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 AC108693.1-201ENST00000496068 432 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 CCDC11P1-201ENST00000503137 1162 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.65□□□□□ -1.34
COL11A1P12107 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.65□□□□□ -1.34
COL11A1P12107 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 PPATP2-201ENST00000605635 508 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL11A1P12107 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.65□□□□□ -1.34
COL11A1P12107 AC004808.2-201ENST00000627965 773 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 AC130304.1-201ENST00000622942 2385 ntBASIC6.65□□□□□ -1.34
COL11A1P12107 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
COL11A1P12107 Z83820.1-201ENST00000456978 1499 ntBASIC6.65□□□□□ -1.35
COL11A1P12107 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL11A1P12107 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.65□□□□□ -1.35
COL11A1P12107 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.65□□□□□ -1.35
COL11A1P12107 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL11A1P12107 SPATA31C1-201ENST00000420021 3895 ntBASIC6.65□□□□□ -1.35
COL11A1P12107 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.65□□□□□ -1.35
COL11A1P12107 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL11A1P12107 CASC19-248ENST00000641674 1356 ntBASIC6.65□□□□□ -1.35
COL11A1P12107 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL11A1P12107 LPP-208ENST00000448637 5835 ntTSL 5 BASIC6.65□□□□□ -1.35
COL11A1P12107 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL11A1P12107 AC241584.2-201ENST00000637142 2090 ntBASIC6.65□□□□□ -1.35
COL11A1P12107 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL11A1P12107 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 RNA5SP30-201ENST00000365552 115 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 TNPO1P1-201ENST00000423641 1138 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 OR4A42P-201ENST00000531397 938 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 HMGB1P42-201ENST00000532126 553 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 MIR1269B-201ENST00000580405 75 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 AP001885.1-201ENST00000621658 558 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.64□□□□□ -1.35
COL11A1P12107 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 CAST-222ENST00000508579 1758 ntTSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL11A1P12107 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL11A1P12107 RNA5SP183-201ENST00000362452 119 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 RPS26P41-201ENST00000450370 284 ntBASIC6.64□□□□□ -1.35
COL11A1P12107 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms