Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SYT14P1-202ENST00000600441 1448 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 AC105749.1-201ENST00000631338 2008 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC6P09630 MAPK10-261ENST00000641050 3109 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
HOXC6P09630 RNA5SP46-201ENST00000362370 120 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 RNA5SP333-201ENST00000363466 118 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 RNA5SP334-201ENST00000364825 118 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 RNU11-6P-201ENST00000391127 133 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AL391422.1-201ENST00000402155 436 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 AC073909.1-201ENST00000447112 999 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 RPL23AP60-201ENST00000450011 454 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 SBDSP1-204ENST00000453858 737 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 RN7SL57P-201ENST00000493687 290 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 EIF3LP3-201ENST00000495197 822 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 NENFP3-201ENST00000503735 313 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AC096754.1-201ENST00000508904 818 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AC002456.2-201ENST00000509356 380 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 AC087360.1-201ENST00000518788 616 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC6P09630 OR56A7P-201ENST00000524865 941 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 KCTD9P4-201ENST00000526766 1166 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.85□□□□□ -1.31
HOXC6P09630 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC6P09630 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 MIR1273E-201ENST00000581165 102 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.85□□□□□ -1.31
HOXC6P09630 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 AC024255.1-201ENST00000614376 102 ntBASIC6.85□□□□□ -1.31
HOXC6P09630 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
HOXC6P09630 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXC6P09630 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
HOXC6P09630 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
HOXC6P09630 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HOXC6P09630 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
HOXC6P09630 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 OR9K1P-201ENST00000326513 941 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 RN7SKP77-201ENST00000363261 353 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC6P09630 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC127526.2-201ENST00000426436 775 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AL451136.1-201ENST00000435399 325 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC083795.1-201ENST00000491760 320 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AC138866.2-201ENST00000508650 584 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.84□□□□□ -1.31
HOXC6P09630 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
HOXC6P09630 HMGN2P36-201ENST00000529541 409 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.84□□□□□ -1.31
HOXC6P09630 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC6P09630 MIR3189-201ENST00000578735 73 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.84□□□□□ -1.31
HOXC6P09630 MIR4505-201ENST00000582238 73 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 AL049840.6-202ENST00000603373 279 ntBASIC6.84□□□□□ -1.31
HOXC6P09630 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.84□□□□□ -1.31
HOXC6P09630 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
HOXC6P09630 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
HOXC6P09630 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC6P09630 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC6P09630 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.84□□□□□ -1.32
HOXC6P09630 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC6P09630 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
HOXC6P09630 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
HOXC6P09630 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC6P09630 AL161901.1-201ENST00000624954 3425 ntBASIC6.83□□□□□ -1.32
HOXC6P09630 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC6P09630 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXC6P09630 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXC6P09630 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
HOXC6P09630 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms